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phylogenomics
💭
phylogenomics
15 followers · 45 following
  • Friday Harbor, United States
  • 22:55 (UTC -07:00)

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8 stars written in Shell
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aidenlab / juicer

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Shell 432 184 Updated Nov 22, 2024

marbl / merqury

k-mer based assembly evaluation

Shell 302 21 Updated Jun 28, 2024

linzhi2013 / MitoZ

MitoZ: A toolkit for assembly, annotation, and visualization of animal mitochondrial genomes

Shell 120 39 Updated Nov 6, 2024

bionitio-team / bionitio

Demonstrating best practices for bioinformatics command line tools

Shell 116 26 Updated Sep 25, 2020

RNAdetective / AIDD

Automated Isoform Discovery Detector

Shell 5 1 Updated Feb 7, 2022

hcdenbakker / N50.sh

bash script to quickly produce some assembly stats

Shell 4 2 Updated Sep 28, 2017

Ag100Pest / mitoPolishCLR

Forked from gf777/mitoVGP

The Mitogenome Assembly Pipeline for CLR + Illumina Ag100Pest

Shell 3 Updated Sep 27, 2022

CAFS-bioinformatics / PEP_scaffolder

use (homologous) proteins to scaffold genomes

Shell 2 Updated May 30, 2019