FelixErnst
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Structstrings Public
📦 Structstrings: implementation of Biostrings to work with dot bracket annotations
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EpiTxDb Public
📦 EpiTxDb: storing and accessing epitranscriptomic information using the AnnotationDbi interface
R UpdatedMar 26, 2024 -
RNAmodR Public
📦 RNAmodR: detection of post-transcriptional RNA modifications based on HTS data
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tRNAscanImport Public
📦 Importing tRNAscan-SE output as GRanges
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tRNA Public
📦 tRNA: Analyzing tRNA sequences and structures
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tRNAdbImport Public
📦 tRNAdbImport: Importing from to tRNAdb and mitotRNAdb as GRanges
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Modstrings Public
📦 Modstrings: implementation of Biostrings to work with nucleotide sequences containing modified nucleotides.
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RNAmodR.AlkAnilineSeq Public
📦 RNAmodR.AlkAnilineSeq: detection of m7G, m3C and D modification by AlkAnilineSeq
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RNAmodR.RiboMethSeq Public
📦 RNAmodR.RiboMethSeq: detection of 2'-O methylations by RiboMethSeq
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RNAmodR.ML Public
📦 RNAmodR.ML: machine learning for detection of post-transcriptional RNA modifications
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xtail-1 Public
Forked from xryanglab/xtailGenome-wide assessment of differential translations with ribosome profiling data
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decontam Public
Forked from benjjneb/decontamSimple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data
R UpdatedFeb 19, 2021 -
scater Public
Forked from alanocallaghan/scaterClone of the Bioconductor repository for the scater package.
R UpdatedJan 28, 2021 -
TreeSummarizedExperiment Public
Forked from markrobinsonuzh/TreeSummarizedExperimentAn extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
R UpdatedJan 22, 2021 -
EpiTxDb.Sc.sacCer3 Public
AnnotationDb for post-transcriptional modifications (Scerevisiae.sacCer3)
R UpdatedJan 14, 2021 -
BiocChallenges Public
Forked from kevinrue/BiocChallengesChallenges for the Biocoductor community.
R Other UpdatedDec 21, 2020 -
Biostrings Public
Forked from Bioconductor/BiostringsEfficient manipulation of biological strings
R UpdatedDec 18, 2020 -
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MicrobiomeExperiment Public archive
Forked from HCBravoLab/MicrobiomeExperimentBioconductor defining a SummarizedExperiment class for microbiome data
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BiocPkgTools Public
Forked from seandavi/BiocPkgToolsComputable build reports, package metadata, and download stats from the Bioconductor project
R MIT License UpdatedOct 12, 2020 -
biocthis Public
Forked from lcolladotor/biocthisAutomate package and project setup for Bioconductor packages
R UpdatedOct 1, 2020 -
EpiTxDb.Hs.hg38 Public
AnnotationDb for post-transcriptional modifications (Hsapiens.hg38)
R UpdatedSep 15, 2020 -
EpiTxDb.Mm.mm10 Public
AnnotationDb for post-transcriptional modifications (Mmusculus.mm10)
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