Docker image failed with OCTIS in requirement

[srashtchi]

• OCTIS version:
• Python version:
• Operating System: MAC 13.2.1 (22D68)

Description

I am trying to containerised my app. OCTIS is in the list of my requirements. During building the docker image, I see installation of all the packages in requirements file except OCTIS!
The point is I can install OCTIS on any environment manually and it works fine but not in building image with Docker.
Below is the error :

 > [6/6] RUN pip install octis:                                                                                                                                                                                                                                                            
#11 0.634 Collecting octis                                                                                                                                                                                                                                                                 
#11 2.434   Downloading octis-1.11.1-py2.py3-none-any.whl (130 kB)                                                                                                                                                                                                                         
#11 3.051      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 130.8/130.8 kB 202.4 kB/s eta 0:00:00                                                                                                                                                                                                 
#11 3.067 Requirement already satisfied: matplotlib in /usr/local/lib/python3.9/site-packages (from octis) (3.7.1)                                                                                                                                                                         
#11 3.067 Requirement already satisfied: sentence-transformers in /usr/local/lib/python3.9/site-packages (from octis) (2.2.2)
#11 3.068 Requirement already satisfied: numpy>=1.19.1 in /usr/local/lib/python3.9/site-packages (from octis) (1.23.5)
#11 3.157 Collecting scikit-learn==0.24.2
#11 3.477   Downloading scikit_learn-0.24.2-cp39-cp39-manylinux2014_aarch64.whl (25.5 MB)
#11 7.661      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 25.5/25.5 MB 5.7 MB/s eta 0:00:00
#11 7.683 Requirement already satisfied: pandas in /usr/local/lib/python3.9/site-packages (from octis) (1.5.3)
#11 7.706 Collecting scikit-optimize>=0.8.1
#11 8.045   Downloading scikit_optimize-0.9.0-py2.py3-none-any.whl (100 kB)
#11 8.060      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 100.3/100.3 kB 9.9 MB/s eta 0:00:00
#11 8.064 Requirement already satisfied: flask in /usr/local/lib/python3.9/site-packages (from octis) (2.2.3)
#11 8.159 Collecting gensim==4.2.0
#11 8.562   Downloading gensim-4.2.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (24.0 MB)
#11 11.08      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 24.0/24.0 MB 7.5 MB/s eta 0:00:00
#11 11.10 Requirement already satisfied: nltk in /usr/local/lib/python3.9/site-packages (from octis) (3.8.1)
#11 11.10 Requirement already satisfied: torch in /usr/local/lib/python3.9/site-packages (from octis) (1.13.1)
#11 11.14 Collecting tomotopy
#11 11.46   Downloading tomotopy-0.12.4.tar.gz (1.3 MB)
#11 11.59      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.3/1.3 MB 11.0 MB/s eta 0:00:00
#11 11.72   Preparing metadata (setup.py): started
#11 11.96   Preparing metadata (setup.py): finished with status 'done'
#11 12.08 Collecting spacy
#11 12.46   Downloading spacy-3.5.1-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (6.3 MB)
#11 13.18      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 6.3/6.3 MB 8.8 MB/s eta 0:00:00
#11 13.20 Requirement already satisfied: requests in /usr/local/lib/python3.9/site-packages (from octis) (2.28.2)
#11 13.21 Collecting libsvm
#11 13.58   Downloading libsvm-3.23.0.4.tar.gz (170 kB)
#11 13.59      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 170.6/170.6 kB 11.6 MB/s eta 0:00:00
#11 13.61   Preparing metadata (setup.py): started
#11 13.75   Preparing metadata (setup.py): finished with status 'done'
#11 13.76 Requirement already satisfied: scipy>=0.18.1 in /usr/local/lib/python3.9/site-packages (from gensim==4.2.0->octis) (1.10.1)
#11 13.78 Collecting smart-open>=1.8.1
#11 14.14   Downloading smart_open-6.3.0-py3-none-any.whl (56 kB)
#11 14.16      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 56.8/56.8 kB 3.8 MB/s eta 0:00:00
#11 14.19 Requirement already satisfied: threadpoolctl>=2.0.0 in /usr/local/lib/python3.9/site-packages (from scikit-learn==0.24.2->octis) (3.1.0)
#11 14.19 Requirement already satisfied: joblib>=0.11 in /usr/local/lib/python3.9/site-packages (from scikit-learn==0.24.2->octis) (1.2.0)
#11 14.23 Collecting pyaml>=16.9
#11 14.60   Downloading pyaml-21.10.1-py2.py3-none-any.whl (24 kB)
#11 14.62 Requirement already satisfied: Jinja2>=3.0 in /usr/local/lib/python3.9/site-packages (from flask->octis) (3.1.2)
#11 14.62 Requirement already satisfied: Werkzeug>=2.2.2 in /usr/local/lib/python3.9/site-packages (from flask->octis) (2.2.3)
#11 14.62 Requirement already satisfied: click>=8.0 in /usr/local/lib/python3.9/site-packages (from flask->octis) (8.1.3)
#11 14.62 Requirement already satisfied: itsdangerous>=2.0 in /usr/local/lib/python3.9/site-packages (from flask->octis) (2.1.2)
#11 14.62 Requirement already satisfied: importlib-metadata>=3.6.0 in /usr/local/lib/python3.9/site-packages (from flask->octis) (6.0.0)
#11 14.63 Requirement already satisfied: fonttools>=4.22.0 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (4.39.0)
#11 14.63 Requirement already satisfied: python-dateutil>=2.7 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (2.8.2)
#11 14.63 Requirement already satisfied: contourpy>=1.0.1 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (1.0.7)
#11 14.63 Requirement already satisfied: pyparsing>=2.3.1 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (3.0.9)
#11 14.64 Requirement already satisfied: pillow>=6.2.0 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (9.4.0)
#11 14.64 Requirement already satisfied: packaging>=20.0 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (23.0)
#11 14.64 Requirement already satisfied: cycler>=0.10 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (0.11.0)
#11 14.64 Requirement already satisfied: importlib-resources>=3.2.0 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (5.12.0)
#11 14.64 Requirement already satisfied: kiwisolver>=1.0.1 in /usr/local/lib/python3.9/site-packages (from matplotlib->octis) (1.4.4)
#11 14.65 Requirement already satisfied: tqdm in /usr/local/lib/python3.9/site-packages (from nltk->octis) (4.65.0)
#11 14.65 Requirement already satisfied: regex>=2021.8.3 in /usr/local/lib/python3.9/site-packages (from nltk->octis) (2022.10.31)
#11 14.66 Requirement already satisfied: pytz>=2020.1 in /usr/local/lib/python3.9/site-packages (from pandas->octis) (2022.7.1)
#11 14.66 Requirement already satisfied: urllib3<1.27,>=1.21.1 in /usr/local/lib/python3.9/site-packages (from requests->octis) (1.26.15)
#11 14.66 Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python3.9/site-packages (from requests->octis) (2022.12.7)
#11 14.66 Requirement already satisfied: idna<4,>=2.5 in /usr/local/lib/python3.9/site-packages (from requests->octis) (3.4)
#11 14.66 Requirement already satisfied: charset-normalizer<4,>=2 in /usr/local/lib/python3.9/site-packages (from requests->octis) (3.1.0)
#11 14.67 Requirement already satisfied: sentencepiece in /usr/local/lib/python3.9/site-packages (from sentence-transformers->octis) (0.1.97)
#11 14.67 Requirement already satisfied: huggingface-hub>=0.4.0 in /usr/local/lib/python3.9/site-packages (from sentence-transformers->octis) (0.13.2)
#11 14.67 Requirement already satisfied: transformers<5.0.0,>=4.6.0 in /usr/local/lib/python3.9/site-packages (from sentence-transformers->octis) (4.26.1)
#11 14.67 Requirement already satisfied: torchvision in /usr/local/lib/python3.9/site-packages (from sentence-transformers->octis) (0.14.1)
#11 14.67 Requirement already satisfied: typing-extensions in /usr/local/lib/python3.9/site-packages (from torch->octis) (4.5.0)
#11 14.74 Collecting cymem<2.1.0,>=2.0.2
#11 15.11   Downloading cymem-2.0.7-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (33 kB)
#11 15.17 Collecting wasabi<1.2.0,>=0.9.1
#11 15.52   Downloading wasabi-1.1.1-py3-none-any.whl (27 kB)
#11 15.59 Collecting murmurhash<1.1.0,>=0.28.0
#11 15.90   Downloading murmurhash-1.0.9-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (20 kB)
#11 15.93 Collecting spacy-loggers<2.0.0,>=1.0.0
#11 16.25   Downloading spacy_loggers-1.0.4-py3-none-any.whl (11 kB)
#11 16.31 Collecting spacy-legacy<3.1.0,>=3.0.11
#11 16.62   Downloading spacy_legacy-3.0.12-py2.py3-none-any.whl (29 kB)
#11 16.67 Collecting catalogue<2.1.0,>=2.0.6
#11 17.06   Downloading catalogue-2.0.8-py3-none-any.whl (17 kB)
#11 17.12 Collecting pathy>=0.10.0
#11 17.43   Downloading pathy-0.10.1-py3-none-any.whl (48 kB)
#11 17.44      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 48.9/48.9 kB 4.2 MB/s eta 0:00:00
#11 17.45 Requirement already satisfied: setuptools in /usr/local/lib/python3.9/site-packages (from spacy->octis) (58.1.0)
#11 17.49 Collecting typer<0.8.0,>=0.3.0
#11 17.80   Downloading typer-0.7.0-py3-none-any.whl (38 kB)
#11 17.94 Collecting pydantic!=1.8,!=1.8.1,<1.11.0,>=1.7.4
#11 18.29   Downloading pydantic-1.10.6-py3-none-any.whl (156 kB)
#11 18.30      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 156.4/156.4 kB 24.9 MB/s eta 0:00:00
#11 18.45 Collecting thinc<8.2.0,>=8.1.8
#11 18.80   Downloading thinc-8.1.9-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (869 kB)
#11 18.85      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 869.8/869.8 kB 22.2 MB/s eta 0:00:00
#11 18.88 Collecting langcodes<4.0.0,>=3.2.0
#11 19.21   Downloading langcodes-3.3.0-py3-none-any.whl (181 kB)
#11 19.23      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 181.6/181.6 kB 15.5 MB/s eta 0:00:00
#11 19.30 Collecting srsly<3.0.0,>=2.4.3
#11 19.62   Downloading srsly-2.4.6-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (488 kB)
#11 19.66      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 488.5/488.5 kB 16.2 MB/s eta 0:00:00
#11 19.72 Collecting preshed<3.1.0,>=3.0.2
#11 20.13   Downloading preshed-3.0.8-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (122 kB)
#11 20.15      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 122.8/122.8 kB 9.5 MB/s eta 0:00:00
#11 20.23 Requirement already satisfied: filelock in /usr/local/lib/python3.9/site-packages (from huggingface-hub>=0.4.0->sentence-transformers->octis) (3.9.1)
#11 20.23 Requirement already satisfied: pyyaml>=5.1 in /usr/local/lib/python3.9/site-packages (from huggingface-hub>=0.4.0->sentence-transformers->octis) (6.0)
#11 20.24 Requirement already satisfied: zipp>=0.5 in /usr/local/lib/python3.9/site-packages (from importlib-metadata>=3.6.0->flask->octis) (3.15.0)
#11 20.27 Requirement already satisfied: MarkupSafe>=2.0 in /usr/local/lib/python3.9/site-packages (from Jinja2>=3.0->flask->octis) (2.1.2)
#11 20.30 Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.9/site-packages (from python-dateutil>=2.7->matplotlib->octis) (1.16.0)
#11 20.41 Collecting blis<0.8.0,>=0.7.8
#11 20.76   Downloading blis-0.7.9-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (1.7 MB)
#11 20.90      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.7/1.7 MB 12.6 MB/s eta 0:00:00
#11 20.94 Collecting confection<1.0.0,>=0.0.1
#11 21.36   Downloading confection-0.0.4-py3-none-any.whl (32 kB)
#11 21.58 Requirement already satisfied: tokenizers!=0.11.3,<0.14,>=0.11.1 in /usr/local/lib/python3.9/site-packages (from transformers<5.0.0,>=4.6.0->sentence-transformers->octis) (0.13.2)
#11 21.67 Building wheels for collected packages: libsvm, tomotopy
#11 21.67   Building wheel for libsvm (setup.py): started
#11 22.79   Building wheel for libsvm (setup.py): finished with status 'done'
#11 22.79   Created wheel for libsvm: filename=libsvm-3.23.0.4-cp39-cp39-linux_aarch64.whl size=253157 sha256=63a95258816251969ae54d95d507853e554001557217e00600ba76b6b4b839d3
#11 22.79   Stored in directory: /root/.cache/pip/wheels/c1/ce/25/0d50035499973fcbcc407fcb897d53e47b6eb4601308789aa6
#11 22.79   Building wheel for tomotopy (setup.py): started
#11 23.11   Building wheel for tomotopy (setup.py): finished with status 'error'
#11 23.12   error: subprocess-exited-with-error
#11 23.12   
#11 23.12   × python setup.py bdist_wheel did not run successfully.
#11 23.12   │ exit code: 1
#11 23.12   ╰─> [45 lines of output]
#11 23.12       running bdist_wheel
#11 23.12       running build
#11 23.12       running build_py
#11 23.12       creating build
#11 23.12       creating build/lib.linux-aarch64-3.9
#11 23.12       creating build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/_version.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/coherence.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/_summary.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/utils.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/label.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/__init__.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       running egg_info
#11 23.12       writing tomotopy.egg-info/PKG-INFO
#11 23.12       writing dependency_links to tomotopy.egg-info/dependency_links.txt
#11 23.12       writing requirements to tomotopy.egg-info/requires.txt
#11 23.12       writing top-level names to tomotopy.egg-info/top_level.txt
#11 23.12       reading manifest file 'tomotopy.egg-info/SOURCES.txt'
#11 23.12       reading manifest template 'MANIFEST.in'
#11 23.12       warning: no files found matching '*.c' under directory 'src'
#11 23.12       warning: no files found matching 'LICENSE.txt'
#11 23.12       adding license file 'LICENSE'
#11 23.12       writing manifest file 'tomotopy.egg-info/SOURCES.txt'
#11 23.12       copying tomotopy/auto_labeling_code.rst -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/auto_labeling_code_with_porter.rst -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/documentation.kr.rst -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       copying tomotopy/documentation.rst -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.12       running build_ext
#11 23.12       building '_tomotopy' extension
#11 23.12       creating build/temp.linux-aarch64-3.9
#11 23.12       creating build/temp.linux-aarch64-3.9/src
#11 23.12       creating build/temp.linux-aarch64-3.9/src/Labeling
#11 23.12       creating build/temp.linux-aarch64-3.9/src/TopicModel
#11 23.12       creating build/temp.linux-aarch64-3.9/src/python
#11 23.12       gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DMODULE_NAME=PyInit__tomotopy -Iinclude -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c src/Labeling/FoRelevance.cpp -o build/temp.linux-aarch64-3.9/src/Labeling/FoRelevance.o -std=c++1y -O3 -fpermissive -Wno-unused-variable -Wno-switch -march=native
#11 23.12       In file included from src/Labeling/../TopicModel/../Utils/Dictionary.h:9,
#11 23.12                        from src/Labeling/../TopicModel/TopicModel.hpp:5,
#11 23.12                        from src/Labeling/Labeler.h:4,
#11 23.12                        from src/Labeling/FoRelevance.h:4,
#11 23.12                        from src/Labeling/FoRelevance.cpp:4:
#11 23.12       src/Labeling/../TopicModel/../Utils/serializer.hpp:10:10: fatal error: Eigen/Dense: No such file or directory
#11 23.12          10 | #include <Eigen/Dense>
#11 23.12             |          ^~~~~~~~~~~~~
#11 23.12       compilation terminated.
#11 23.12       error: command '/usr/bin/gcc' failed with exit code 1
#11 23.12       [end of output]
#11 23.12   
#11 23.12   note: This error originates from a subprocess, and is likely not a problem with pip.
#11 23.12   ERROR: Failed building wheel for tomotopy
#11 23.12   Running setup.py clean for tomotopy
#11 23.28 Successfully built libsvm
#11 23.28 Failed to build tomotopy
#11 23.48 Installing collected packages: cymem, wasabi, typer, tomotopy, spacy-loggers, spacy-legacy, smart-open, pydantic, pyaml, murmurhash, libsvm, langcodes, catalogue, blis, srsly, scikit-learn, preshed, pathy, gensim, scikit-optimize, confection, thinc, spacy, octis
#11 23.52   Running setup.py install for tomotopy: started
#11 23.81   Running setup.py install for tomotopy: finished with status 'error'
#11 23.82   error: subprocess-exited-with-error
#11 23.82   
#11 23.82   × Running setup.py install for tomotopy did not run successfully.
#11 23.82   │ exit code: 1
#11 23.82   ╰─> [45 lines of output]
#11 23.82       running install
#11 23.82       running build
#11 23.82       running build_py
#11 23.82       creating build
#11 23.82       creating build/lib.linux-aarch64-3.9
#11 23.82       creating build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/_version.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/coherence.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/_summary.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/utils.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/label.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/__init__.py -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       running egg_info
#11 23.82       writing tomotopy.egg-info/PKG-INFO
#11 23.82       writing dependency_links to tomotopy.egg-info/dependency_links.txt
#11 23.82       writing requirements to tomotopy.egg-info/requires.txt
#11 23.82       writing top-level names to tomotopy.egg-info/top_level.txt
#11 23.82       reading manifest file 'tomotopy.egg-info/SOURCES.txt'
#11 23.82       reading manifest template 'MANIFEST.in'
#11 23.82       warning: no files found matching '*.c' under directory 'src'
#11 23.82       warning: no files found matching 'LICENSE.txt'
#11 23.82       adding license file 'LICENSE'
#11 23.82       writing manifest file 'tomotopy.egg-info/SOURCES.txt'
#11 23.82       copying tomotopy/auto_labeling_code.rst -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/auto_labeling_code_with_porter.rst -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/documentation.kr.rst -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       copying tomotopy/documentation.rst -> build/lib.linux-aarch64-3.9/tomotopy
#11 23.82       running build_ext
#11 23.82       building '_tomotopy' extension
#11 23.82       creating build/temp.linux-aarch64-3.9
#11 23.82       creating build/temp.linux-aarch64-3.9/src
#11 23.82       creating build/temp.linux-aarch64-3.9/src/Labeling
#11 23.82       creating build/temp.linux-aarch64-3.9/src/TopicModel
#11 23.82       creating build/temp.linux-aarch64-3.9/src/python
#11 23.82       gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DMODULE_NAME=PyInit__tomotopy -Iinclude -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c src/Labeling/FoRelevance.cpp -o build/temp.linux-aarch64-3.9/src/Labeling/FoRelevance.o -std=c++1y -O3 -fpermissive -Wno-unused-variable -Wno-switch -march=native
#11 23.82       In file included from src/Labeling/../TopicModel/../Utils/Dictionary.h:9,
#11 23.82                        from src/Labeling/../TopicModel/TopicModel.hpp:5,
#11 23.82                        from src/Labeling/Labeler.h:4,
#11 23.82                        from src/Labeling/FoRelevance.h:4,
#11 23.82                        from src/Labeling/FoRelevance.cpp:4:
#11 23.82       src/Labeling/../TopicModel/../Utils/serializer.hpp:10:10: fatal error: Eigen/Dense: No such file or directory
#11 23.82          10 | #include <Eigen/Dense>
#11 23.82             |          ^~~~~~~~~~~~~
#11 23.82       compilation terminated.
#11 23.82       error: command '/usr/bin/gcc' failed with exit code 1
#11 23.82       [end of output]
#11 23.82   
#11 23.82   note: This error originates from a subprocess, and is likely not a problem with pip.
#11 23.82 error: legacy-install-failure
#11 23.82 
#11 23.82 × Encountered error while trying to install package.
#11 23.82 ╰─> tomotopy
#11 23.82 
#11 23.82 note: This is an issue with the package mentioned above, not pip.
#11 23.82 hint: See above for output from the failure.

[srashtchi]

Hi @silviatti
I would appreciate if you could get back to me on this as it stoped my work since last month.

[silviatti]

Hi @srashtchi, sorry for the late reply.

It seems something related to the installation of tomotopy. This dependency is not necessary for OCTIS, as you can use other topic models. I could create an installation for OCTIS that doesn't include it. I can do it in the weekend.

Otherwise, you can try to contact the creators of tomotopy here: https://github.com/bab2min/tomotopy.

Silvia

[srashtchi]

Hi @silviatti
Many thanks for getting back to me on this. I really appreciate it if you could take care of it.

Shabnam

[srashtchi]

@silviatti any luck on this? I really appreciate you get back to me on this issue.

[silviatti]

Hi @srashtchi , sorry for the late reply. I encountered a few issues, so I decided to create a separate branch (dev_no_tomotopy) and remove tomotopy dependencies from there. You can then try to install octis with this command:

pip install git+https://github.com/MIND-Lab/OCTIS@dev_no_tomotopy 

Hope this solves the problem.

[srashtchi]

Hi @silviatti
Thanks a lot for your valuable time on this. I will test it and get back to you if there were any remaining issue.
Cheers
Shabnam

[srashtchi]

Thanks @silviatti
The new changes resolve the issue for now.

Cheers