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data

  • problematic_sites_sarsCov2.vcf obtained from https://github.com/W-L/ProblematicSites_SARS-CoV2 (no license)
    • this is a listing of polymorphisms in the SARS-CoV-2 genome known to be associated with systematic experimental error (e.g., sequencing biases).
  • lineages.csv obtained from https://github.com/cov-lineages/pango-designation (released under Creative Commons CC-BY-NC 4.0)
    • this is a listing of SARS-CoV-2 genome sequences associated with the designation of a new Pango lineage by Áine O'Toole, Angie Hinrichs, Rachel Colquhoun, and others.