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Commits on Jan 15, 2025

• Updated documentation

  Shians

  committed
  1fa5ca2

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• Changed agg region width std.dev to round to whole number

  Shians

  committed
  4e46ddd

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• Updated region plot x and y axis labels

  Shians

  committed
  517b58a

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• Updated user guide regarding create_tabix_file format guessing

  Shians

  committed
  e55f72a

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Commits on Jan 6, 2025

• Changed documentation hard wrapping

  Shians

  committed
  6a00de3

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Commits on Dec 31, 2024

• Version bump

  Shians

  committed
  a3c67cf

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• Removed unused -hts call

  Shians

  committed
  66f215b

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Commits on Dec 17, 2024

• Version bump

  Shians

  committed
  69ebae6

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• Merge branch 'devel' of git.bioconductor.org:packages/NanoMethViz into devel

  Shians

  committed
  76826ac

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• Fixed unnecesary zlibbioc dependency

  Shians

  committed
  fd60a81

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Commits on Oct 29, 2024

• bump x.y.z version to odd y following creation of RELEASE_3_20 branch

  jwokaty

  committed
  1ee21fe

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• bump x.y.z version to even y prior to creation of RELEASE_3_20 branch

  jwokaty

  committed
  3003b57

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Commits on Oct 10, 2024

• Ensure that all system.file calls must work

  Shians

  committed
  d06902a

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Commits on Sep 18, 2024

• Added preliminary support for modkit data

  Shians

  committed
  5a411a6

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• Initial implementation of modkit data import

  Shians

  committed
  4f81810

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Commits on Aug 23, 2024

• Refactored package check logic

  Shians

  committed
  9833a47

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• Fixed handling of missing packages

  Shians

  committed
  65ca5a6

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• Reverted progress bar change

  Shians

  committed
  2d454d8

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Commits on Aug 22, 2024

• Refactored modbam to tabix

  Shians

  committed
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Commits on Aug 21, 2024

• Stop CI on macOS, segfault issue likely due to system setup and difference in compilers of libraries r-lib/actions#780, r-lib/devtools#1292

  Shians

  committed
  b5cc72c

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Commits on Aug 20, 2024

• Changed MacOS build system

  Shians

  committed
  32c23bf

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• Fixed function name

  Shians

  committed
  c41f7a9

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• Updated docs

  Shians

  committed
  d1fafaa

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Commits on Aug 19, 2024

• Added pkgdown

  Shians

  committed
  a0a8d3a

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Commits on Aug 15, 2024

• Changed modification parsing flag behaviour to follow IGV rather than SAM spec

  Shians

  committed
  c932cc7

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Commits on Jul 26, 2024

• Added test for GRanges heatmap

  Shians

  committed
  85f92bd

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• Fixed query_methy to always return result of same length as query

  Shians

  committed
  156b1e8

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• Added test for annotation region

  Shians

  committed
  b466103

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• Updated docs

  Shians

  committed
  7ebf2c8

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Commits on Jul 11, 2024

• Added bedmethyl_col_names()

  Shians

  committed
  eb03b00

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Commits on Jul 10, 2024

• Initial class for storing a genome

  Shians

  committed
  dbf9a52

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Commits on Jul 9, 2024

• Merge branch 'devel' of github.com:Shians/NanoMethViz into devel

  Shians

  committed
  e235f84

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• Changed if statements into switch

  Shians

  committed
  b124ff3

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Commits on Jul 8, 2024

• Fixed parsing when in ParseMode::skip_low_prob mode

  Shians

  committed
  e061533

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Commits on Jun 3, 2024

• Update issue templates

  Shians

  authored
  7ce832b

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