forked from marbl/canu
-
Notifications
You must be signed in to change notification settings - Fork 0
/
version_update.pl
executable file
·221 lines (177 loc) · 6.1 KB
/
version_update.pl
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
#!/usr/bin/env perl
###############################################################################
#
# This file is part of canu, a software program that assembles whole-genome
# sequencing reads into contigs.
#
# This software is based on:
# 'Canu' v2.0 (https://github.com/marbl/canu)
# which is based on:
# 'Celera Assembler' r4587 (http://wgs-assembler.sourceforge.net)
# the 'kmer package' r1994 (http://kmer.sourceforge.net)
#
# Except as indicated otherwise, this is a 'United States Government Work',
# and is released in the public domain.
#
# File 'README.licenses' in the root directory of this distribution
# contains full conditions and disclaimers.
##
use strict;
use File::Compare;
use Cwd qw(getcwd);
my $cwd = getcwd();
# This script expects a module name on the command line, e.g.,
# 'version-update.pl canu'. This name is used is the non-git based version
# string.
#
# On release change $label to 'release', update $major and $minor. Make the
# release, then change label back to 'snapshot'. This will result in the
# released code having a version string of "$modName 1.9".
my $modName = shift @ARGV;
my $MODNAME = $modName; $MODNAME =~ tr/a-z-/A-Z_/;
my $verFile = shift @ARGV;
my $label = "snapshot"; # If not 'release' print this in the version output.
my $major = "2"; # Bump before release.
my $minor = "1"; # Bump before release.
my $branch = "master";
my $version = "v$major.$minor";
my @submodules;
my $commits = undef;
my $hash1 = undef; # This from 'git describe'
my $hash2 = undef; # This from 'git rev-list'
my $revCount = 0;
my $dirty = undef;
my $dirtya = undef;
my $dirtyc = undef;
# Required module name on the command line.
if (($modName eq "") || ($modName eq undef) || ($verFile eq undef)) {
die "usage: $0 module-name version-file.H\n";
}
# If in a git repo, we can get the actual values.
if (-d "../.git") {
$label = "snapshot";
# Count the number of changes since the last release.
open(F, "git rev-list HEAD |") or die "Failed to run 'git rev-list'.\n";
while (<F>) {
chomp;
$hash2 = $_ if (!defined($hash2));
$revCount++;
}
close(F);
# Find the commit and version we're at.
open(F, "git describe --tags --long --always --abbrev=40 |") or die "Failed to run 'git describe'.\n";
while (<F>) {
chomp;
if (m/^v(\d+)\.(.+)-(\d+)-g(.{40})$/) {
$major = $1;
$minor = $2;
$commits = $3;
$hash1 = $4;
$version = "v$major.$minor";
} else {
$major = "0";
$minor = "0";
$commits = "0";
$hash1 = $_;
$version = "v$major.$minor";
}
}
close(F);
# Decide if we've got locally committed changes.
open(F, "git status |");
while (<F>) {
if (m/is\s+ahead\s/) {
$dirtya = "ahead of github";
}
if (m/not\s+staged\s+for\s+commit/) {
$dirtyc = "uncommitted changes";
}
}
close(F);
if (defined($dirtya) && defined($dirtyc)) {
$dirty = "ahead of github w/changes";
}
elsif (defined($dirtya)) {
$dirty = "ahead of github";
}
elsif (defined($dirtyc)) {
$dirty = "w/changes";
}
else {
$dirty = "sync'd with github";
}
# But if we're on a branch, replace the version with the name of the branch.
open(F, "git rev-parse --abbrev-ref HEAD |");
while (<F>) {
chomp;
$branch = $_;
}
if ($branch ne "master") {
if ($branch =~ m/v(\d+)\.(\d+)/) {
$major = $1;
$minor = $2;
}
$label = "branch";
$version = $branch;
}
# Get information on any submodules here.
open(F, "git submodule status |");
while (<F>) {
if (m/^(.*)\s+(.*)\s+\((.*)\)$/) {
push @submodules, "$2 $3 $1";
}
}
close(F);
}
# If not in a git repo, we might be able to figure things out based on the directory name.
elsif ($cwd =~ m/$modName-(.{40})\/src/) {
$label = "snapshot";
$hash1 = $1;
$hash2 = $1;
}
elsif ($cwd =~ m/$modName-master\/src/) {
$label = "master-snapshot";
}
# Report what we found. This is really for the gmake output.
if (defined($commits)) {
print "\$(info Building $label $version +$commits changes (r$revCount $hash1) ($dirty))\n";
foreach my $s (@submodules) {
print "\$(info \$(space) $s)\n";
}
} else {
print "\$(info Building $label $version)\n";
}
# Dump a new file, but don't overwrite the original.
open(F, "> ${verFile}.new") or die "Failed to open '${verFile}.new' for writing: $!\n";
print F "// Automagically generated by version_update.pl! Do not commit!\n";
print F "#define ${MODNAME}_VERSION_LABEL \"$label\"\n";
print F "#define ${MODNAME}_VERSION_MAJOR \"$major\"\n";
print F "#define ${MODNAME}_VERSION_MINOR \"$minor\"\n";
print F "#define ${MODNAME}_VERSION_COMMITS \"$commits\"\n";
print F "#define ${MODNAME}_VERSION_REVISION \"$revCount\"\n";
print F "#define ${MODNAME}_VERSION_HASH \"$hash1\"\n";
print F "\n";
if (defined($commits)) {
print F "#define ${MODNAME}_VERSION \"$modName $label $version +$commits changes (r$revCount $hash1)\\n\"\n";
} elsif (defined($hash1)) {
print F "#define ${MODNAME}_VERSION \"$modName snapshot ($hash1)\\n\"\n";
} elsif ($label =~ m/release/) {
print F "#define ${MODNAME}_VERSION \"$modName $major.$minor\\n\"\n";
} else {
print F "#define ${MODNAME}_VERSION \"$modName $label ($version)\\n\"\n";
}
if ($MODNAME ne "MERYL_UTILITY") {
print F "\n";
print F "#undef MERYL_UTILITY_VERSION\n";
print F "#define MERYL_UTILITY_VERSION ${MODNAME}_VERSION\n";
}
close(F);
# If they're the same, don't replace the original.
if (compare("${verFile}", "${verFile}.new") == 0) {
unlink "${verFile}.new";
} else {
unlink "${verFile}";
rename "${verFile}.new", "${verFile}";
}
# That's all, folks!
exit(0);