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Commits on Mar 28, 2024

• Update README.md to discuss penalty application

  tobybaker

  authored
  f8b4f02

• small tweaks

  tobybaker

  committed
  2419288

• small tweaks

  tobybaker

  committed
  5ffd55c

• fixed gain index sorting

  tobybaker

  committed
  e519ace

Commits on Jan 19, 2024

• fixed pre_wgd_probability

  tobybaker

  committed
  dd3648a

Commits on Oct 29, 2023

• added storage of samples from prior and associated LL as an additional output

  tobybaker

  committed
  2af2bf7

Commits on Oct 22, 2023

• added to readme

  tobybaker

  committed
  6249846

• fixed subclone fractions

  tobybaker

  committed
  be9c5c4

• fixed posterior gen in cases where there are no timeable gains

  tobybaker

  committed
  df3f9b9

Commits on Oct 10, 2023

• fixed WGD calling logic

  tobybaker

  committed
  6c041f5

Commits on Oct 9, 2023

• fixed setup.py typo

  tobybaker

  committed
  76a41a6

• fixed WGD calling logic, and filtering chr from Chromosome column

  tobybaker

  committed
  137efd9

• update readme

  tobybaker

  committed
  1159283

• added help to command args

  tobybaker

  committed
  75f8036

Commits on Oct 2, 2023

• added extra warning

  tobybaker

  committed
  7d0bc99

• fixed groupby related issue with WGD timing

  tobybaker

  committed
  c8fd64d

• added pip to README

  tobybaker

  committed
  2bc0048

• updated README

  tobybaker

  committed
  c2286a4

Commits on Sep 29, 2023

• Merge branch 'main' of https://github.com/VanLoo-lab/gritic

  tobybaker

  committed
  fcadff9

• Initial commit

  tobybaker

  authored
  8e4f0f4

• initial commit

  tobybaker

  committed
  336a76d