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test_arctic.py
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import time
from datetime import datetime as dt
import pytest
from mock import patch, MagicMock
from pandas.util.testing import assert_frame_equal
from pymongo.errors import OperationFailure
from arctic.arctic import Arctic, VERSION_STORE
from arctic.exceptions import LibraryNotFoundException, QuotaExceededException
from ..util import get_large_ts
def test_connect_to_Arctic_string(mongo_host):
arctic = Arctic(mongo_host=mongo_host)
assert arctic.list_libraries() == []
assert arctic.mongo_host == mongo_host
def test_connect_to_Arctic_connection(mongo_server, mongo_host):
arctic = Arctic(mongo_server.api)
assert arctic.list_libraries() == []
assert arctic.mongo_host == mongo_host
def test_reset_Arctic(mongo_host, library_name):
arctic = Arctic(mongo_host=mongo_host)
arctic.list_libraries()
arctic.initialize_library(library_name, VERSION_STORE)
c = arctic._conn
assert arctic[library_name]._arctic_lib._curr_conn is c
arctic.reset()
assert c is not arctic._conn
assert len(c.nodes) == 0
assert arctic[library_name]._arctic_lib._curr_conn is arctic._conn
def test_re_authenticate_on_arctic_reset(mongo_host, library_name):
from collections import namedtuple
Cred = namedtuple('Cred', 'user, password')
with patch('arctic.arctic.authenticate') as auth_mock, \
patch('arctic.arctic.get_auth') as get_auth_mock:
auth_mock.return_value = True
get_auth_mock.return_value = Cred(user='a_username', password='a_passwd')
arctic = Arctic(mongo_host=mongo_host)
arctic.initialize_library(library_name, VERSION_STORE)
vstore = arctic[library_name]
vstore.list_symbols()
auth_mock.reset_mock()
arctic.reset()
assert auth_mock.call_count > 0
auth_mock.reset_mock()
vstore.list_symbols()
assert auth_mock.call_count == 0
def test_simple(library):
sym = 'symbol'
data = get_large_ts(100)
library.write(sym, data)
orig = dt.now()
time.sleep(1) # Move the timestamp on 1ms
data2 = get_large_ts(100)
library.write(sym, data2, prune_previous_version=False)
# Get the timeseries, it should be the same
read2 = library.read(sym).data
assert_frame_equal(read2, data2)
# Ensure we can get the previous version
read = library.read(sym, as_of=orig).data
assert_frame_equal(read, data)
def test_indexes(arctic):
c = arctic._conn
arctic.initialize_library("library", VERSION_STORE, segment='month')
chunk = c.arctic.library.index_information()
index_version = chunk['_id_']['v'] # Mongo 3.2 has index v1, 3.4 and 3.5 have v2 (3.4 can run in compabitility mode with v1)
assert chunk == {u'_id_': {u'key': [(u'_id', 1)], u'ns': u'arctic.library', u'v': index_version},
u'symbol_1_parent_1_segment_1': {u'background': True,
u'key': [(u'symbol', 1),
(u'parent', 1),
(u'segment', 1)],
u'ns': u'arctic.library',
u'unique': True,
u'v': index_version},
u'symbol_1_sha_1': {u'background': True,
u'key': [(u'symbol', 1), (u'sha', 1)],
u'ns': u'arctic.library',
u'unique': True,
u'v': index_version},
u'symbol_hashed': {u'background': True,
u'key': [(u'symbol', u'hashed')],
u'ns': u'arctic.library',
u'v': index_version},
u'symbol_1_sha_1_segment_1': {u'background': True,
u'key': [(u'symbol', 1), (u'sha', 1), (u'segment', 1)],
u'ns': u'arctic.library',
u'unique': True,
u'v': index_version}}
snapshots = c.arctic.library.snapshots.index_information()
assert snapshots == {u'_id_': {u'key': [(u'_id', 1)],
u'ns': u'arctic.library.snapshots',
u'v': index_version},
u'name_1': {u'background': True,
u'key': [(u'name', 1)],
u'ns': u'arctic.library.snapshots',
u'unique': True,
u'v': index_version}}
versions = c.arctic.library.versions.index_information()
assert versions == {u'_id_': {u'key': [(u'_id', 1)],
u'ns': u'arctic.library.versions',
u'v': index_version},
u'symbol_1__id_-1': {u'background': True,
u'key': [(u'symbol', 1), (u'_id', -1)],
u'ns': u'arctic.library.versions',
u'v': index_version},
u'symbol_1_version_-1': {u'background': True,
u'key': [(u'symbol', 1), (u'version', -1)],
u'ns': u'arctic.library.versions',
u'unique': True,
u'v': index_version}}
version_nums = c.arctic.library.version_nums.index_information()
assert version_nums == {u'_id_': {u'key': [(u'_id', 1)],
u'ns': u'arctic.library.version_nums',
u'v': index_version},
u'symbol_1': {u'background': True,
u'key': [(u'symbol', 1)],
u'ns': u'arctic.library.version_nums',
u'unique': True,
u'v': index_version}}
def test_delete_library(arctic, library, library_name):
mongo = arctic._conn
# create a library2 library too - ensure that this isn't deleted
arctic.initialize_library('user.library2', VERSION_STORE, segment='month')
library.write('asdf', get_large_ts(1))
assert 'TEST' in mongo.arctic_test.list_collection_names()
assert 'TEST.versions' in mongo.arctic_test.list_collection_names()
assert 'library2' in mongo.arctic_user.list_collection_names()
assert 'library2.versions' in mongo.arctic_user.list_collection_names()
arctic.delete_library(library_name)
assert 'TEST' not in mongo.arctic_user.list_collection_names()
assert 'TEST.versions' not in mongo.arctic_user.list_collection_names()
with pytest.raises(LibraryNotFoundException):
arctic[library_name]
with pytest.raises(LibraryNotFoundException):
arctic['arctic_{}'.format(library_name)]
assert 'library2' in mongo.arctic_user.list_collection_names()
assert 'library2.versions' in mongo.arctic_user.list_collection_names()
def test_quota(arctic, library, library_name):
thing = list(range(100))
library._arctic_lib.set_quota(10)
assert arctic.get_quota(library_name) == 10
assert library._arctic_lib.get_quota() == 10
library.write('thing', thing)
with pytest.raises(QuotaExceededException):
library.write('ts', thing)
library.write('ts', thing)
library.write('ts', thing)
library.write('ts', thing)
with pytest.raises(QuotaExceededException):
arctic.check_quota(library_name)
def test_check_quota(arctic, library, library_name):
with patch('arctic.arctic.logger.info') as info:
arctic.check_quota(library_name)
assert info.call_count == 1
def test_default_mongo_retry_timout():
now = time.time()
with pytest.raises(LibraryNotFoundException):
Arctic('unresolved-host', serverSelectionTimeoutMS=0)['some.lib']
assert time.time() - now < 1.
def test_lib_rename(arctic):
arctic.initialize_library('test')
l = arctic['test']
l.write('test_data', 'abc')
arctic.rename_library('test', 'new_name')
l = arctic['new_name']
assert(l.read('test_data').data == 'abc')
with pytest.raises(LibraryNotFoundException) as e:
l = arctic['test']
assert('Library test' in str(e))
assert('test' not in arctic.list_libraries())
def test_lib_rename_namespace(arctic):
arctic.initialize_library('namespace.test')
l = arctic['namespace.test']
l.write('test_data', 'abc')
with pytest.raises(ValueError) as e:
arctic.rename_library('namespace.test', 'new_namespace.test')
assert('Collection can only be renamed in the same database' in str(e))
arctic.rename_library('namespace.test', 'namespace.newlib')
l = arctic['namespace.newlib']
assert(l.read('test_data').data == 'abc')
with pytest.raises(LibraryNotFoundException) as e:
l = arctic['namespace.test']
assert('Library namespace.test' in str(e))
assert('namespace.test' not in arctic.list_libraries())
def test_lib_type(arctic):
arctic.initialize_library('test')
assert(arctic.get_library_type('test') == VERSION_STORE)
def test_library_exists(arctic):
arctic.initialize_library('test')
assert arctic.library_exists('test')
assert not arctic.library_exists('nonexistentlib')
def test_library_exists_no_auth(arctic):
arctic.initialize_library('test')
with patch('arctic.arctic.ArcticLibraryBinding') as AB:
AB.return_value = MagicMock(
get_library_type=MagicMock(side_effect=OperationFailure("not authorized on arctic to execute command")))
assert arctic.library_exists('test')
assert AB.return_value.get_library_type.called
assert not arctic.library_exists('nonexistentlib')
def test_list_libraries_cached(arctic):
# default in arctic is to cache list_libraries.
libs = ['test1', 'test2']
for lib in libs:
arctic.initialize_library(lib)
# Cached data should have been appended to cache.
assert sorted(libs) == sorted(arctic.list_libraries()) == sorted(arctic._list_libraries())
# Should default to uncached list_libraries if cache is empty.
with patch('arctic.arctic.Arctic._list_libraries', return_value=libs) as uncached_list_libraries:
# Empty cache manually.
arctic._conn.meta_db.cache.remove({})
assert arctic._list_libraries_cached() == libs
uncached_list_libraries.assert_called()
# Reload cache and check that it has data
arctic.reload_cache()
assert sorted(arctic._cache.get('list_libraries')) == sorted(libs)
# Should fetch it from cache the second time.
with patch('arctic.arctic.Arctic._list_libraries', return_value=libs) as uncached_list_libraries:
assert arctic._list_libraries_cached() == libs
uncached_list_libraries.assert_not_called()
def test_initialize_library_adds_to_cache(arctic):
libs = ['test1', 'test2']
for lib in libs:
arctic.initialize_library(lib)
arctic.reload_cache()
assert arctic._list_libraries_cached() == arctic._list_libraries()
# Add another lib
arctic.initialize_library('test3')
assert sorted(arctic._cache.get('list_libraries')) == ['test1', 'test2', 'test3']
def test_cache_does_not_return_stale_data(arctic):
libs = ['test1', 'test2']
for lib in libs:
arctic.initialize_library(lib)
arctic.reload_cache()
assert arctic._list_libraries_cached() == arctic._list_libraries()
time.sleep(0.2)
# Should call uncached list_libraries if the data is stale according to caller.
with patch('arctic.arctic.Arctic._list_libraries', return_value=libs) as uncached_list_libraries:
assert arctic._list_libraries_cached(newer_than_secs=0.1) == libs
uncached_list_libraries.assert_called()
def test_renaming_returns_new_name_in_cache(arctic):
libs = ['test1', 'test2']
for lib in libs:
arctic.initialize_library(lib)
assert arctic._list_libraries_cached() == arctic._list_libraries()
arctic.rename_library('test1', 'test3')
assert sorted(arctic._list_libraries_cached()) == sorted(['test2', 'test3'])
def test_deleting_library_removes_it_from_cache(arctic):
libs = ['test1', 'test2']
for lib in libs:
arctic.initialize_library(lib)
arctic.delete_library('test1')
assert arctic._list_libraries_cached() == arctic._list_libraries() == arctic.list_libraries() == ['test2']