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Commits on Jan 10, 2021

• Add argparse

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Commits on Feb 25, 2020

• add trec grid search

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• add trec model including data prep and evaluation

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Commits on Feb 24, 2020

• add function to create tf dataset

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• add new hpo-omim data processor

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Commits on Feb 18, 2020

• add the linear (ease) model

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• add pubmed/medline abstract data retrieve script

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• add code for grid search

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• add config.use_core_tensor

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• add alternate data processing functions, including creating direct omim-hpo matrix and weighted ancestary matrix

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Commits on Feb 3, 2020

• remove unused code

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• create ancestry sparse matrix

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Commits on Jan 29, 2020

• add tf.function to main components

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• improve speed of the data pipeline and the evaluation

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• Change data pipeline to use tf.dataset

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Commits on Jan 28, 2020

• add direct hypernyms to the train set

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• add code to create hypernymy graph and induced links

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Commits on Jan 27, 2020

• add experiment parameters

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• add main function and config for tucker

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• add reading dataset into the experiment

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Commits on Jan 26, 2020

• fix pylint error bug

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• experiment first version

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• evaluation first commit

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• tucker first version

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Commits on Jan 24, 2020

• add function for creating datasets

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Commits on Jan 23, 2020

• fix

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• moved data files

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• init code base

  

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Commits on May 9, 2019

• Adding dataset files

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• Adding dataset files

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• Adding dataset files

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• Adding dataset files

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• Adding dataset files

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• Adding dataset files

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• adding data files

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