From d9d1df455146744185b53524074961d09b9553b2 Mon Sep 17 00:00:00 2001 From: "Brian P. Walenz" Date: Fri, 9 Sep 2016 16:45:50 -0400 Subject: [PATCH] Add comments. --- src/pipelines/canu/OverlapStore.pm | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/src/pipelines/canu/OverlapStore.pm b/src/pipelines/canu/OverlapStore.pm index 3d4b71e5d..4e7e4ca83 100644 --- a/src/pipelines/canu/OverlapStore.pm +++ b/src/pipelines/canu/OverlapStore.pm @@ -170,7 +170,9 @@ sub overlapStoreConfigure ($$$$) { system("mkdir -p $wrk/$asm.ovlStore.BUILDING/scripts") if (! -d "$wrk/$asm.ovlStore.BUILDING/scripts"); system("mkdir -p $wrk/$asm.ovlStore.BUILDING/logs") if (! -d "$wrk/$asm.ovlStore.BUILDING/logs"); - # Run the normal store build, but just to get the partitioning. + # Run the normal store build, but just to get the partitioning. ovStoreBuild internally + # writes to config.WORKING, then renames when it is finished. No need for the script + # to be overly careful about incomplete files. if (! -e "$wrk/$asm.ovlStore.BUILDING/scripts/0-config.sh") { open(F, "> $wrk/$asm.ovlStore.BUILDING/scripts/0-config.sh") or die;