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Commits on Oct 27, 2022

• small fix

  dauparas

  committed
  02b135f

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Commits on Oct 26, 2022

• update readme

  dauparas

  committed
  8296cdf

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• add license

  dauparas

  committed
  b34aa84

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• adding training data and training scripts

  dauparas

  committed
  8806741

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Commits on Sep 30, 2022

• hiding future warnings from jax

  sokrypton

  committed
  e7da7a3

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Commits on Aug 19, 2022

• updating to work with latest changes

  dauparas

  committed
  905b008

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• update to work with changes

  dauparas

  committed
  d9af74f

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• updating to work with the latest changes

  dauparas

  committed
  ca7d822

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• update README with output

  dauparas

  committed
  8f864cf

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• upadate README

  dauparas

  committed
  5c0ca74

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• merging vanilla and CA ProteinMPNN versions into one script

  dauparas

  committed
  e198bd5

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Commits on Aug 17, 2022

• small README update

  dauparas

  committed
  015ff82

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• update h_V_stack for fixed regions - thanks to Chentong Wang for spotting this

  dauparas

  committed
  4b2ea2e

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• allow to specify a random seed

  dauparas

  committed
  97d62c7

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• remove type=bool since action="store_true" is given

  dauparas

  committed
  31a978a

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• Merge pull request #16 from benf549/main

  Show description for 1f63a79
  dauparas

  authored
  1f63a79

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• remove erroneous space when parsing for backbone oxygen atoms.

  benf549

  committed
  ecc2bec

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• Merge pull request #12 from CyrusBiotechnology/deduplicate-helper-scripts

  Show description for fe2b424
  dauparas

  authored
  fe2b424

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Commits on Jul 27, 2022

• deduplicating helper scripts

  decarboxy

  committed
  b2230c7

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Commits on Jun 20, 2022

• updating af_backprop version

  sokrypton

  authored
  c602ced

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Commits on Jun 17, 2022

• adding logic to split chains

  sokrypton

  committed
  4ec7228

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• adding support for MMalign (for TMscore compute)

  sokrypton

  committed
  06478cf

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Commits on Jun 15, 2022

• add submit_example_8.sh for global polar AA bias, write git_hash to ouputs, and additional CA-only model - v_48_010

  dauparas

  committed
  d2a72a9

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Commits on Jun 14, 2022

• fixing bug in model_num option (was always showing model 0)

  sokrypton

  committed
  441db78

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• removing example

  sokrypton

  committed
  13d47cc

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• Update quickdemo_wAF2.ipynb

  sokrypton

  authored
  0143fa7

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• cleaning up the code

  sokrypton

  committed
  d4aa027

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• cleaning up options

  sokrypton

  committed
  d1c1ba5

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• cleaning up the code, adding automated scan of all sequences

  sokrypton

  committed
  ba6b2b3

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• Created using Colaboratory

  sokrypton

  committed
  7bfc279

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• Created using Colaboratory

  sokrypton

  committed
  fdf27de

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Commits on Jun 9, 2022

• Adding CA-only model notebook

  dauparas

  committed
  0a72127

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• allow to pass input_chain_list for colab notebooks

  dauparas

  committed
  009fee6

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• small README change

  dauparas

  committed
  51a7a8e

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• adding CA-only code and models

  dauparas

  committed
  de51346

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