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Pure Python implementation of the squarify treemap layout algorithm
Graspot: A graph attention network for spatial transcriptomics data integration with optimal transport
[ACL'24] Selective Reflection-Tuning: Student-Selected Data Recycling for LLM Instruction-Tuning
An open-source RAG-based tool for chatting with your documents.
Move and resize windows on macOS with keyboard shortcuts and snap areas
A reactive notebook for Python — run reproducible experiments, execute as a script, deploy as an app, and version with git.
A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
Statistical package in Python based on Pandas
Learning coupled matrix factorizations in Python
Temporal Regularized Matrix Factorization
A Python implementation of edgeR for differential expression analysis
Differential expression analysis for single-cell RNA-seq data.
TensorDict is a pytorch dedicated tensor container.
The R package utilizes a statistical model to identify mitochondrial mutations.
Signature Analysis and Visualization for Single-Cell RNA-seq
Convert between AnnData and SingleCellExperiment
Testing differences in cell type proportions from single-cell data.
Supervised Pathway DEConvolution of InTerpretable Gene ProgRAms
An alternative approach to capture the breadth of cellular functions by performing a functional analysis of existing biological networks.
single cell Flux Estimation Analysis (scFEA) Try the below web server!