You can always download the latest stable version of the h2o R package from the following page: http://h2o-release.s3.amazonaws.com/h2o/latest_stable.html
Alternatively, you can build the h2o R package from source (see below), or install the package from CRAN.
The R package is built as part of the normal build process. Please following this instruction to build H2O-3.
If you want to build the R component by itself, instead of executing ./gradlew build, you can execute the following: $ cd h2o-r; ../gradlew build.
The output of the build is a CRAN-like layout in the R directory.
The output of the build is a CRAN-like layout in the R directory.
-
Navigate to the top-level
h2o-3directory:cd ~/h2o-3. -
Install the H2O package for R:
R CMD INSTALL h2o-r/R/src/contrib/h2o_****.tar.gzNote: Do not copy and paste the command above. You must replace the asterisks (*) with the current H2O .tar version number. Look in the
h2o-3/h2o-r/R/src/contrib/directory for the version number.
- Detach any currently loaded H2O package for R.
if ("package:h2o" %in% search()) detach("package:h2o", unload=TRUE)
- Remove any previously installed H2O package for R.
if ("h2o" %in% rownames(installed.packages())) remove.packages("h2o")
- Install H2O R package along with its dependencies.
Install latest CRAN version:
install.packages("h2o")
Install latest H2O repo version, 1-2 releases ahead:
repos <- c("https://h2o-release.s3.amazonaws.com/h2o/rel-turing/9/R", getOption("repos"))
install.packages("h2o", type="source", repos=repos)
Note: Do not copy and paste the command above. You may need to replace rel-turchin/9 with the current H2O build number. Refer to the H2O download page at h2o.ai/download for latest build number.
Make sure your current directory is the h2o-3 top directory.
$ java -jar h2o-app/build/libs/h2o-app.jar
10-08 12:33:32.410 172.16.2.32:54321 22468 main INFO: ----- H2O started -----
10-08 12:33:32.484 172.16.2.32:54321 22468 main INFO: Build git branch: (unknown)
10-08 12:33:32.484 172.16.2.32:54321 22468 main INFO: Build git hash: (unknown)
10-08 12:33:32.485 172.16.2.32:54321 22468 main INFO: Build git describe: (unknown)
10-08 12:33:32.485 172.16.2.32:54321 22468 main INFO: Build project version: (unknown)
10-08 12:33:32.485 172.16.2.32:54321 22468 main INFO: Built by: '(unknown)'
10-08 12:33:32.485 172.16.2.32:54321 22468 main INFO: Built on: '(unknown)'
10-08 12:33:32.485 172.16.2.32:54321 22468 main INFO: Java availableProcessors: 8
10-08 12:33:32.485 172.16.2.32:54321 22468 main INFO: Java heap totalMemory: 245.5 MB
10-08 12:33:32.485 172.16.2.32:54321 22468 main INFO: Java heap maxMemory: 3.56 GB
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: Java version: Java 1.7.0_51 (from Oracle Corporation)
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: OS version: Mac OS X 10.9.4 (x86_64)
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: Possible IP Address: en0 (en0), fe80:0:0:0:2acf:e9ff:fe1c:ccf%4
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: Possible IP Address: en0 (en0), 172.16.2.32
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: Possible IP Address: lo0 (lo0), fe80:0:0:0:0:0:0:1%1
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: Possible IP Address: lo0 (lo0), 0:0:0:0:0:0:0:1
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: Possible IP Address: lo0 (lo0), 127.0.0.1
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: Internal communication uses port: 54322
10-08 12:33:32.486 172.16.2.32:54321 22468 main INFO: Listening for HTTP and REST traffic on http://172.16.2.32:54321/
10-08 12:33:32.487 172.16.2.32:54321 22468 main INFO: H2O cloud name: 'tomk' on /172.16.2.32:54321, discovery address /225.54.105.89:57654
10-08 12:33:32.487 172.16.2.32:54321 22468 main INFO: If you have trouble connecting, try SSH tunneling from your local machine (e.g., via port 55555):
10-08 12:33:32.487 172.16.2.32:54321 22468 main INFO: 1. Open a terminal and run 'ssh -L 55555:localhost:54321 [email protected]'
10-08 12:33:32.487 172.16.2.32:54321 22468 main INFO: 2. Point your browser to http://localhost:55555
10-08 12:33:32.583 172.16.2.32:54321 22468 main INFO: Cloud of size 1 formed [/172.16.2.32:54321]
10-08 12:33:32.583 172.16.2.32:54321 22468 main INFO: Log dir: '/tmp/h2o-tomk/h2ologs'
To load the H2O package in R, use library(h2o)
----------------------------------------------------------------------
Your next step is to start H2O and get a connection object (named
'localH2O', for example):
> localH2O = h2o.init()
For H2O package documentation, ask for help:
> ??h2o
After starting H2O, you can use the Web UI at http://localhost:54321
For more information visit http://docs.h2o.ai
----------------------------------------------------------------------
To launch H2O, use localH2O = h2o.init(nthreads = - 1)
Note: The nthreads = -1 parameter launches H2O using all available CPUs and is only applicable if you launch H2O locally using R. If you start H2O locally outside of R or start H2O on Hadoop, the nthreads = -1 parameter is not applicable.
H2O is not running yet, starting it now...
Note: In case of errors look at the following log files:
/var/folders/yl/cq5nhky53hjcl9wrqxt39kz80000gn/T//RtmpKkZY3r/h2o_H2O_User_started_from_r.out
/var/folders/yl/cq5nhky53hjcl9wrqxt39kz80000gn/T//RtmpKkZY3r/h2o_H2O_User_started_from_r.err
java version "1.8.0_25"
Java(TM) SE Runtime Environment (build 1.8.0_25-b17)
Java HotSpot(TM) 64-Bit Server VM (build 25.25-b02, mixed mode)
.Successfully connected to http://127.0.0.1:54321/
R is connected to H2O cluster:
H2O cluster uptime: 1 seconds 405 milliseconds
H2O cluster version: 3.1.0.3031
H2O cluster name: H2O_started_from_R_H2O_User_nqf165
H2O cluster total nodes: 1
H2O cluster total memory: 3.56 GB
H2O cluster total cores: 8
H2O cluster allowed cores: 2
H2O cluster healthy: TRUE
Note: As started, H2O is limited to the CRAN default of 2 CPUs.
Shut down and restart H2O as shown below to use all your CPUs.
> h2o.shutdown(localH2O)
> localH2O = h2o.init(nthreads = -1)