paramgroups.json

[
  {
    "name": "Basic Options",
    "description": "Basic parameters used to run STplot",
    "hidden": false,
    "parameters": [
      "input.file",
      "genes",
      "samples"
    ]
  },
  {
    "name": "Display Options",
    "description": "Options for customizing the look and feel of plots",
    "hidden": false,
    "parameters": [
      "color.palette",
      "colors",
      "point.size"
    ]
  },
  {
    "name": "Domain Options",
    "description": "Options for plots utilizing spatial domain (clustering) data",
    "hidden": true,
    "parameters": [
      "spatial.weights",
      "dynamic.tree.cut",
      "minimum.clusters",
      "maximum.clusters",
      "deep.split"
    ]
  },
  {
    "name": "Grid Options",
    "description": "Options for arranging the resulting plots in a grid",
    "hidden": true,
    "parameters": [
      "display.in.grid",
      "grid.rows",
      "grid.columns",
      "common.legend",
      "legend.location"
    ]
  }
]