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Commits on Nov 26, 2015

• Added back GenBank file creation

  nielshanson

  committed
  fc777c2

Commits on Nov 25, 2015

• Merge branch 'master' of https://github.com/hallamlab/metapathways2

  nielshanson

  committed
  9a34877

• Corrected RPKM buffer-overflow and memory leak problems, corrected argument parsing

  nielshanson

  committed
  a7a826c

Commits on Nov 1, 2015

• Added metapathways logo to README

  

  Niels Hanson

  committed
  5b9b9bf

Commits on Jul 7, 2015

• Update README with v2.5.2 information

  

  Niels Hanson

  committed
  a601ce4

• v2.5.2 release

  nielshanson

  committed
  5b278da

Commits on Jul 4, 2015

• Fixed rRNA DB formatting problem, GenBank input file misses, rpkm calculation from .sam files

  nielshanson

  committed
  81100ea

Commits on Jul 3, 2015

• Updated citation

  

  Niels Hanson

  committed
  76bc587

• Updated gitignore

  nielshanson

  committed
  05ac7c8

Commits on May 8, 2015

• Merge branch 'master' of https://github.com/hallamlab/metapathways2

  nielshanson

  committed
  bc2b329

• Started unit tests for MP scripts

  nielshanson

  committed
  0dd223b

Commits on Mar 9, 2015

• Fixed bug preventing annotations from gbk files being used.

  nielshanson

  committed
  643826d

Commits on Feb 25, 2015

• Merge branch 'master' of https://github.com/kishori82/metapathways2

  kishori82

  committed
  9185355

• format LAST from 40M to 4000M ; parse blast optimized

  kishori82

  committed
  7697332

Commits on Feb 22, 2015

• Updated frontpage with citation.

  

  Niels Hanson

  committed
  9ae4d84

Commits on Feb 21, 2015

• Updated lastal binary

  

  nielshanson

  committed
  08a5b82

Commits on Feb 20, 2015

• Made float comparisons more stable; confirmed new BSR computation on OSX

  nielshanson

  committed
  f5dd47e

• removed old lastal

  kishori82

  committed
  e54c6da

• Added remaining files for pull

  kishori82

  committed
  5261480

• adeed formatdb

  kishori82

  committed
  6177e0a

• Fixed automatic picking up of param and config files, fixed refscore calculation to make independent of BLAST and LAST executables, adjust parse balst file to compute the bitscore internally from a…

  Show description for fe4babe
  kishori82

  committed
  fe4babe

Commits on Feb 10, 2015

• Updated stale lastdb and lastal binaries for Ubuntu

  

  nielshanson

  committed
  50b5572

Commits on Feb 5, 2015

• Merge branch 'master' of https://github.com/kishori82/metapathways2

  kishori82

  committed
  8b88514

• fixed BLAST autoformatting problem and collapsed annotation orfs, pathologic input and report generation

  kishori82

  committed
  140712c

Commits on Jan 13, 2015

• added back all the executables

  nielshanson

  committed
  5e57517

Commits on Jan 7, 2015

• Fixed reformatting of old databases, rpkm sam file issue

  kishori82

  committed
  ad4c5af

Commits on Dec 8, 2014

• fixed empty file

  kishori82

  committed
  3e24c37

• Added error for lastal failure

  

  Kishori Mohan Konwar

  committed
  e39b96b

• Added the provision for invalid file

  kishori82

  committed
  3d260ba

Commits on Dec 5, 2014

• Merge branch 'master' of https://github.com/kishori82/metapathways2

  kishori82

  committed
  9a8d6b2

• Fixed to skip samples with incorrect input

  kishori82

  committed
  bda5ac9

Commits on Nov 27, 2014

• Update README.md

  

  Niels Hanson

  committed
  dcd1cc3

• Update README.md

  

  Niels Hanson

  committed
  9df0b6d

• Updated with links to the new v2.5 release.

  

  Niels Hanson

  committed
  ed24df9

• Updated readme

  nielshanson

  committed
  9521205

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