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Commits on Feb 26, 2018

• Merge pull request sanger-pathogens#213 from eppinglen/master

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  ssjunnebo

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Commits on Feb 19, 2018

• card db bz2|gz regex

  eppinglen

  committed
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Commits on Feb 9, 2018

• version 2.11.1

  eppinglen

  committed
  1dfb58b

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• fixed card db path

  eppinglen

  committed
  18be23e

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Commits on Feb 2, 2018

• remove deploy

  andrewjpage

  committed
  c659946

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• Merge branch 'master' of github.com:sanger-pathogens/ariba

  andrewjpage

  committed
  1363dcc

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• automatically release to pypi

  andrewjpage

  committed
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• Update setup.py

  andrewjpage

  authored
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• Merge pull request sanger-pathogens#210 from andreyto/at_spades

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  martinghunt

  authored
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Commits on Feb 1, 2018

• Reintroduce Spades as another assembly option. Multithreading for Spades and Bowtie2.

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  Andrey Tovchigrechko

  committed
  e86c9c1

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• Remove reference to spades options in tests that are not using spades.

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  Andrey Tovchigrechko

  committed
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• Option to run subprocess w/o shell

  

  Andrey Tovchigrechko

  committed
  601e86c

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• Merge pull request sanger-pathogens#209 from andrewjpage/master

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  andrewjpage

  authored
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• dont require X to run ariba

  andrewjpage

  committed
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Commits on Jan 12, 2018

• Merge pull request sanger-pathogens#208 from ssjunnebo/574328_fix_readme

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  ssjunnebo

  authored
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• update readme

  

  Sara Sjunnebo

  committed
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Commits on Nov 24, 2017

• Merge pull request sanger-pathogens#204 from martinghunt/mlst_hetmin_bug

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  martinghunt

  authored
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• Version bump 2.10.3

  martinghunt

  committed
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• Bug fix, was getting max instead of min het percent

  martinghunt

  committed
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Commits on Nov 8, 2017

• Merge pull request sanger-pathogens#202 from martinghunt/master

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  martinghunt

  authored
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• Version bump 2.10.2

  martinghunt

  committed
  91d5f70

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• Merge pull request sanger-pathogens#201 from JezSw/hotfix/changeCardToBZ2

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  martinghunt

  authored
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Commits on Nov 7, 2017

• Changed card to utilise .tar.bz2 from .tar.gz

  

  Jez Swann

  authored and

  Jez Swann

  committed
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Commits on Aug 30, 2017

• Merge pull request sanger-pathogens#195 from EdwardBetts/patch-1

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  andrewjpage

  authored
  54d0686

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• correct spelling mistake

  EdwardBetts

  authored
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Commits on Aug 14, 2017

• Merge pull request sanger-pathogens#194 from martinghunt/master

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  martinghunt

  authored
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• Add curl

  martinghunt

  committed
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• Merge pull request sanger-pathogens#193 from martinghunt/bowtie2_version_issues

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  martinghunt

  authored
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• Version bump 2.10.1

  martinghunt

  committed
  20fe8c1

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• Change mapping options bor bowtie 2.3.1 and later

  martinghunt

  committed
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• Merge pull request sanger-pathogens#192 from aunderwo/master

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  martinghunt

  authored
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Commits on Aug 13, 2017

• Fix utf-8 encoding problems

  antunderwood

  authored
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Commits on Aug 11, 2017

• Merge pull request sanger-pathogens#191 from martinghunt/update_docker_file

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  martinghunt

  authored
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• Install specific release instead of master branch

  martinghunt

  committed
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Commits on Jun 28, 2017

• Merge pull request sanger-pathogens#182 from martinghunt/reviewer_issues

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  martinghunt

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