diff --git a/dev-db/percona-toolkit/Manifest b/dev-db/percona-toolkit/Manifest
index 62b4a28cf654c..efd1b10c4f09b 100644
--- a/dev-db/percona-toolkit/Manifest
+++ b/dev-db/percona-toolkit/Manifest
@@ -1,4 +1,3 @@
-DIST percona-toolkit-3.5.3.tar.gz 14673470 BLAKE2B f0eeaaf20924a75ff68eb623d4027fd8402169bbd8479e91ec174638f20109cee33a3e93b19dd88cd860a3f572db7e0a645fb1bd96e63f52c5d261167ad5eae8 SHA512 80abe6fe1d690d8faff01d72918c5b5da188819389d0fafe8f88f23489b609aa9730b0c7c2b284eb057e0cc3ae8ccb5b83849b31ff61291d8ab75d58abcdf85f
 DIST percona-toolkit-3.5.5.tar.gz 14847253 BLAKE2B f26b88581b84a12fd2b353984b2dbfbf43056388a48821739e70f43a28f448fc7caea99bdb0f5284b91ce04436e0969da1eec85e66054bfc1e8ff2771dede6d2 SHA512 0fb367e2a967c1a459e2d8a70f3db6c75043caf4127c14472b2bdfdb89415286c9f52929e326fa4f402d73a4c3e95b4cf8b0ee0f0624e54e382e44eb653bfaf9
 DIST percona-toolkit-3.5.7-deps.tar.xz 108954608 BLAKE2B 788246531bdf3e1faa7d310fdd920b2fa42d9d82a75d730bb143047d0ce0c22d23ee86cf58bd646aae3dac503d88793040168be15fc74a7686979233a8d65dc1 SHA512 54a0698c5e3ae0fe30b6e253a31829db4c4656cccd48107126a5b99c148fe1ed9515d91e79784e1970569bfe8853d1b5cb74cf968dbc2d08e95aec6ef209659d
 DIST percona-toolkit-3.5.7.tar.gz 138784243 BLAKE2B a589c884348ad820ccadbb871ad85bf89a21ae49e8cea34fa019c61ab53302a5b7db03f01ae191138e15f61c77068388cb5d3863f360a7207d9f9075e9100385 SHA512 cfe232aa5b59d262242348ec18b676d0d8c7752dddadd1f027772346e02d329f5bc53b96dfdb82fbdb18524095f88ad0721e4b4c6ed611c727c0a5cde85998bd
diff --git a/dev-db/percona-toolkit/percona-toolkit-3.5.3.ebuild b/dev-db/percona-toolkit/percona-toolkit-3.5.3.ebuild
deleted file mode 100644
index 488a2c1862261..0000000000000
--- a/dev-db/percona-toolkit/percona-toolkit-3.5.3.ebuild
+++ /dev/null
@@ -1,51 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-inherit perl-module
-
-DESCRIPTION="Advanced command-line tools to perform a variety of MySQL and system tasks"
-HOMEPAGE="https://www.percona.com/software/mysql-tools/percona-toolkit"
-SRC_URI="https://www.percona.com/downloads/${PN}/${PV}/source/tarball/${P}.tar.gz"
-
-LICENSE="|| ( GPL-2 Artistic )"
-SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-# Package warrants IUSE doc
-IUSE=""
-
-COMMON_DEPEND="dev-perl/DBI
-	dev-perl/DBD-mysql
-	virtual/perl-Time-HiRes"
-RDEPEND="${COMMON_DEPEND}
-	dev-perl/JSON
-	dev-perl/libwww-perl
-	dev-perl/Role-Tiny
-	virtual/perl-File-Path
-	virtual/perl-Getopt-Long
-	virtual/perl-Time-Local
-	virtual/perl-Digest-MD5
-	virtual/perl-IO-Compress
-	virtual/perl-File-Temp
-	virtual/perl-File-Spec
-	virtual/perl-Scalar-List-Utils
-	dev-perl/TermReadKey"
-DEPEND="${COMMON_DEPEND}
-	virtual/perl-ExtUtils-MakeMaker"
-
-# Bug #501904 - CVE-2014-2029
-# sed -i -e '/^=item --\[no\]version-check/,/^default: yes/{/^default: yes/d}' bin/*
-# ^ is *-no-versioncheck.patch
-PATCHES=(
-	"${FILESDIR}"/${PN}-3.0.7-no-versioncheck.patch
-	"${FILESDIR}"/${PN}-3.0.10-slave-delay-fix.patch
-)
-
-src_prepare() {
-	default
-
-	sed -i \
-		-e "s/=> 'percona-toolkit',/=> 'Percona::Toolkit',/g" \
-		Makefile.PL || die
-}