Nim is a statically typed compiled systems programming language. It combines successful concepts from mature languages like Python, Ada and Modula. Its design focuses on efficiency, expressiveness,…

My experiments in weaponizing Nim (https://nim-lang.org/)

A fast, ergonomic and portable tensor library in Nim with a deep learning focus for CPU, GPU and embedded devices via OpenMP, Cuda and OpenCL backends

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Tool for easily installing and managing multiple versions of the Nim programming language.

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

genetic variant expressions, annotation, and filtering for great good.

A port of ggplot2 for Nim

nim wrapper for htslib for parsing genomics data files

don't get DUP'ed or DEL'ed by your putative SVs.

Detect novel (and reference) STR expansions from short-read data

seqcover allows users to view coverage for hundreds of genes and dozens of samples

Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang

Nim for awk programmers. A library of awk functions in nim

use the noise

pedigree file parsing and relatedness calculations for nim