From 2efd792246ae5f738c47ccc8dbd16b161da63a7d Mon Sep 17 00:00:00 2001 From: Liang Ding Date: Sun, 4 Aug 2019 21:01:07 -0500 Subject: [PATCH] Revert "updated example commands output dir" This reverts commit 2571850868d8036ec1f2d9e6b2ae6ee487901318. --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index ca7b4be..1b77b64 100644 --- a/README.md +++ b/README.md @@ -91,11 +91,11 @@ input parameters and bootstrap parameters respectively. ## Examples to create a transcription factor network ### Running on an IBM LSF cluster -```sjaracne local -e ./test_data/inputs/BRCA100.exp -g ./test_data/inputs/tf.txt -n 2 -o ./test_data/outputs/cwl/cwlexec``` +```sjaracne local -e ./test_data/inputs/BRCA100.exp -g ./test_data/inputs/tf.txt -n 2 -o ./test_data/outputs/cwl/cwltool/SJARACNE_out.final``` ### Running on a single machine (Linux/OSX) -```sjaracne lsf -j ./SJARACNe/config/config_cwlexec.json -e ./test_data/inputs/BRCA100.exp -g ./test_data/inputs/tf.txt -n 2 -o ./test_data/outputs/cwl/cwltool``` +```sjaracne lsf -j ./SJARACNe/config/config_cwlexec.json -e ./test_data/inputs/BRCA100.exp -g ./test_data/inputs/tf.txt -n 2 -o ./test_data/outputs/cwl/cwltool/SJARACNE_out.final``` ## Reference