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Commits on May 28, 2019

• Better defaults for critical value

  alexandrebouchard

  committed
  8e34437

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• Resimplify, add adjustable critical value

  alexandrebouchard

  committed
  4be590f

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• Another missing commit

  alexandrebouchard

  committed
  f969b2d

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• Missing commit of a util

  alexandrebouchard

  committed
  ce6bdc0

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• Simplifies calibration check utility

  alexandrebouchard

  committed
  0cad03d

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• Add calibration test, fixes in generate data, fixes in delta method

  alexandrebouchard

  committed
  9a03b31

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Commits on May 19, 2019

• More identifiable version

  alexandrebouchard

  committed
  73b1d17

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• First model to compare two initial conditions

  alexandrebouchard

  committed
  b5c4f3a

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• Updated version of delta method, prettified

  alexandrebouchard

  committed
  0704ba7

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Commits on May 11, 2019

• Add initial count widenings of intervals, fix log, add plotting

  alexandrebouchard

  committed
  ef0178e

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• Add delta method estimator

  alexandrebouchard

  committed
  e927faf

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Commits on May 10, 2019

• Code to create benchmark harness

  alexandrebouchard

  committed
  090f71a

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Commits on Apr 20, 2019

• Fix broken test

  alexandrebouchard

  committed
  615996d

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• Upgrade blangSDK

  alexandrebouchard

  committed
  e738b2d

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Commits on Apr 10, 2019

• Edits from meeting with Fatemeh

  alexandrebouchard

  committed
  9c8aecb

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Commits on Feb 8, 2019

• Code for goodness of fit experiments

  alexandrebouchard

  committed
  3466cae

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Commits on Jan 18, 2019

• Prototype of dud control modelling

  alexandrebouchard

  committed
  cc3a3be

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Commits on Jan 17, 2019

• Fix a numerical issue

  alexandrebouchard

  committed
  0d89a67

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• Better name, add executable

  alexandrebouchard

  committed
  aa68a99

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• Trying new parameterization to the Yule to allow infinite means

  alexandrebouchard

  committed
  74f854e

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Commits on Dec 12, 2018

• Improve instructions

  alexandrebouchard

  committed
  5b2200e

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• Add tree grow utility

  alexandrebouchard

  committed
  474261e

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• Add cmd line option for rate bounds

  alexandrebouchard

  committed
  ec30098

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Commits on Dec 9, 2018

• Add option to disable cell reallocation

  alexandrebouchard

  committed
  5418153

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Commits on Dec 8, 2018

• Simplify likelihood caching

  alexandrebouchard

  committed
  83f19ba

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• Add cell sampler. Warning: changes interpretation of iteration counts!

  Show description for 28e7994
  alexandrebouchard

  committed
  28e7994

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• Remove some dead code, add comments

  alexandrebouchard

  committed
  5b99f4d

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Commits on Nov 7, 2018

• Bug fix in genomeMap arising in concatenation data

  alexandrebouchard

  committed
  5648980

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• Fix broken test

  alexandrebouchard

  committed
  e9b565a

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• Fix travis link

  alexandrebouchard

  committed
  1523368

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• Add travis CI

  alexandrebouchard

  committed
  9169215

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• Performance improvement for the caching of concatenated matrices

  alexandrebouchard

  committed
  05e15d6

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• Fix bug that emerged in the concatenation model

  alexandrebouchard

  committed
  6b1ed72

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Commits on Nov 1, 2018

• Fix in last commit

  alexandrebouchard

  committed
  261bda6

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• Add preprocessing script declaration

  alexandrebouchard

  committed
  c5fbede

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