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Code accompanying our manuscript "Coordinated cellular neighborhoods orchestrate antitumoral immunity at the colorectal cancer invasive front"

Jupyter Notebook 56 18 Updated Nov 4, 2024

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

Kotlin 340 80 Updated Dec 25, 2024
Jupyter Notebook 13 2 Updated Jan 21, 2023

Sequence analysis using USEARCH pipelines

Shell 7 3 Updated Jan 13, 2021

A RepSeq processing swiss-knife

Groovy 41 19 Updated Mar 29, 2024
Python 9 Updated Sep 25, 2024