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Issues list

Reusing modified basecalling results
#300 opened Jun 21, 2022 by ziczhang
8
Updating "file formats" docs for additional clarity? documentation Improvements or additions to documentation good first issue Good for newcomers
#206 opened Oct 28, 2021 by lyijin
2
Megalodon Extras: Ref File-Case sensitive
#231 opened Jan 6, 2022 by jcolicchio-soundag
Remora parameter question 5hC_5mC vs 5mC question Further information is requested
#239 opened Jan 24, 2022 by Eric-CH-Chen
2
Instruction about mod_mapping format question Further information is requested
#246 opened Feb 7, 2022 by vahidAK
5
Expected release of all-context methylation models for kit 12?
#252 opened Feb 16, 2022 by Kirk3gaard
2
megalodon.megalodon_helper.MegaError: Data covering index does not exist.
#257 opened Feb 28, 2022 by Fatihlrcfs
3
Add metadata to BAM files
#270 opened Apr 11, 2022 by benbfly
1
Client 1 has timed out.
#274 opened Apr 19, 2022 by jowodo
5
RuntimeError: Link iteration failed (incorrect metadata checksum after all read attempts)
#279 opened May 4, 2022 by billytcl
1
Models for 6mA methylations coming?
#291 opened Jun 1, 2022 by Kirk3gaard
6
Segmentation fault (core dumped) on running Megalodon
#292 opened Jun 8, 2022 by nmierzam
9
Barcode support/ demultiplexing enhancement New feature or request
#43 opened Jul 22, 2020 by ChloeDG
13
KeyError: 'stratify_type is not a file in the archive'
#298 opened Jun 16, 2022 by jon-xu
6
Aggregate separated results
#306 opened Jul 14, 2022 by javiersanchezlorente
1
Much higher reads quality by megalodon than Guppy
#313 opened Aug 6, 2022 by yanchunzhang
2
Megalodon spawns 26 processes despite specifying 16 processes at runtime
#314 opened Aug 8, 2022 by bbyrns
1
Unsupported number of states
#315 opened Aug 10, 2022 by mmahlke
3
running megalodon with all context DNA methylation models
#319 opened Aug 29, 2022 by AlineMuyle
3
Setting up input for epigenetic modification detection
#324 opened Oct 3, 2022 by GianlucaMattei
1
How to Maximize 5hmC Calling Efficiency
#326 opened Oct 18, 2022 by andrew-galbraith
2
Megalodon not producing any output, sitting idle
#327 opened Oct 24, 2022 by bastian-wur
2
How to convert mod_mapping.bam to bed file
#329 opened Oct 31, 2022 by JeremyQuo
3
Filter fail reads with Megalodon vs Remora
#330 opened Nov 2, 2022 by Coracollar
About R10.4.1
#357 opened Nov 5, 2024 by HW-Superior
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