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[BUG] ISA-Json writing @id referencing might lose information #492

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HLWeil opened this issue Feb 5, 2025 · 0 comments
Open

[BUG] ISA-Json writing @id referencing might lose information #492

HLWeil opened this issue Feb 5, 2025 · 0 comments
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Type: Bug Something is not working, and it is confirmed by maintainers to be a bug.

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@HLWeil
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HLWeil commented Feb 5, 2025

Describe the bug
Characteristics are not correctly handled between samples in different assays/studies before being written to ISA-Json. This can lead to lost information.

To Reproduce

  • Create an ARC
  • Add study
    • Add table with output sample
  • Add assay
    • Add table with the same input sample
    • Add characterstic
  • Export to ISA json making use of useIDReferencing

@xiaoranzhou
@github-actions github-actions bot added the Status: Needs Triage This item is up for investigation. label Feb 5, 2025
@HLWeil HLWeil added Type: Bug Something is not working, and it is confirmed by maintainers to be a bug. and removed Status: Needs Triage This item is up for investigation. labels Feb 5, 2025
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Type: Bug Something is not working, and it is confirmed by maintainers to be a bug.
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@HLWeil