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    19 repositories

    • forum-discourse-theme-clean

      Public
      A clean theme for discourse
      SCSS
      •
      MIT License
      •8•0•0•0•Updated Jan 3, 2025Jan 3, 2025

    • cloudinfo

      Public
      Cloud instance type and price information as a service
      Go
      •
      Apache License 2.0
      •37•0•0•18•Updated Dec 24, 2024Dec 24, 2024

    • seqera_ai_extension

      Public
      ⏩ Continue is the leading open-source AI code assistant. You can connect any models and any context to build custom autocomplete and chat experiences inside VS Code and JetBrains
      TypeScript
      •
      Apache License 2.0
      •1.9k•0•0•0•Updated Oct 12, 2024Oct 12, 2024

    • nf-benchmark

      Public
      Nextflow
      •3•0•0•0•Updated May 16, 2024May 16, 2024

    • spack

      Public
      A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
      Python
      •
      Other
      •2.3k•0•1•1•Updated Jan 12, 2024Jan 12, 2024

    • surrealdb.java

      Public
      SurrealDB driver for Java
      Java
      •
      Apache License 2.0
      •22•0•0•0•Updated Jul 14, 2023Jul 14, 2023

    • containers

      Public
      Bitnami container images
      Shell
      •
      Apache License 2.0
      •5k•0•0•0•Updated Jan 26, 2023Jan 26, 2023

    • spillway

      Public
      A simple, distributed and flexible rate limiter
      Java
      •
      MIT License
      •12•0•0•0•Updated Nov 2, 2022Nov 2, 2022

    • ffq

      Public
      Development fork of ffq. Please see main repository:
      Python
      •
      MIT License
      •47•0•0•0•Updated Jul 5, 2022Jul 5, 2022

    • nextflow-tutorial

      Public
      Nextflow training material for introductory tutorial
      Nextflow
      •
      MIT License
      •56•103•0•1•Updated May 13, 2022May 13, 2022

    • amazon-ebs-autoscale

      Public
      Don't run out of disk space on your EC2 instance when generating or working with large files. Automatically add EBS volumes to a filesystem mount point in response to disk utilization.
      Shell
      •
      MIT License
      •60•0•0•0•Updated May 9, 2022May 9, 2022

    • nf-secrets-ci-tests

      Public
      Test pipeline for secrets feature
      Nextflow
      •
      MIT License
      •4•1•0•0•Updated Feb 11, 2022Feb 11, 2022

    • merge-from-upstream-repo

      Public
      ⤵️ Merge changes from an upstream repo. Useful for syncing upstream changes.
      MIT License
      •17•0•0•0•Updated Jan 31, 2022Jan 31, 2022

    • goofys

      Public
      a high-performance, POSIX-ish Amazon S3 file system written in Go
      Go
      •
      Apache License 2.0
      •525•0•2•0•Updated May 19, 2021May 19, 2021

    • rnaseq

      Public
      RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
      Nextflow
      •
      MIT License
      •713•0•0•0•Updated Apr 30, 2021Apr 30, 2021

    • rnaseq-nf

      Public
      A proof of concept of RNAseq pipeline
      Nextflow
      •
      Mozilla Public License 2.0
      •104•1•0•0•Updated Oct 18, 2020Oct 18, 2020

    • workflow-execution-service-schemas

      Public
      The WES API is a standard way to run and manage portable workflows.
      Python
      •
      Apache License 2.0
      •38•0•0•0•Updated Jun 23, 2020Jun 23, 2020

    • ncov2019-artic-nf

      Public
      A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019
      Nextflow
      •86•2•0•0•Updated Apr 1, 2020Apr 1, 2020

    • configs

      Public
      Config files used to define parameters specific to compute environments at different Institutions
      Nextflow
      •
      MIT License
      •277•0•0•0•Updated Mar 6, 2020Mar 6, 2020