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Commits on Jul 9, 2019

• deterministic result?

  

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  7b2dd6b

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Commits on Jul 5, 2019

• add --cleaning-rounds and --disconnect-ratio options

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Commits on Jul 4, 2019

• refactor continue mode in megahit script

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• polish megahit script

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Commits on Jul 2, 2019

• fixed data racing in remove_low_depth

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• fixed data racing checked by thread sanitizer

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Commits on Jul 1, 2019

• push xfopen in utils.h

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• clang-format

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• refactor copy_substr

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Commits on Jun 30, 2019

• fixed SequenceLib::Read

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• more flexible async sequence reader

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• move WriteSequence to SeqPackage

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• new class: edge counter

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• remove unused include

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• use SeqView to access sequence in SeqPackage

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Commits on Jun 29, 2019

• release 1.2.5-beta

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• Merge remote-tracking branch 'origin' into dev

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• remove parallel sort and fixed uncollected resources in contig2fastg

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Commits on Jun 26, 2019

• fixes for passing older version of g++

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Commits on Jun 25, 2019

• fixed missing buuble_seq.fa when estimating contig sizes

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• allow to set mercy factor via environment variable

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• remove unused files & add coverage test for contig2fastg

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• refactor seq_io: contig & edge

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• move contig info into contig reader

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Commits on Jun 24, 2019

• update travis

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• using pprintpp

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Commits on Jun 23, 2019

• remove unused functions

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• offset filler

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• create base_engine.cpp

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  2060cda

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• move offset iterator to base

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  4643777

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• refine large diff key logic

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  3f035c9

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• fixed misalignment error

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• unsigned kmer size

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• move memory adjustment to base class

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• renaming

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