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Issues list

Example data output incorrect?
#44 by kc199 was closed Jan 17, 2022
8
java.lang.IllegalArgumentException: Invalid reference index -1
#43 by thesnakeguy was closed Jan 14, 2022
1
VCF file with static reference chrM 16569
#41 by haansi was closed Nov 3, 2020
1
line break in raw.txt file
#39 by haansi was closed Nov 3, 2020
1
Coverage FWD / REV in variant file enhancement
#38 by haansi was closed Sep 29, 2020
1
htsjdk.samtools.SAMException: Unable to find entry for contig: rCRS
#33 by Jiafeng-Li-leon was closed Aug 24, 2020
1
Java Memory Exception
#28 by jdpleiness was closed Dec 11, 2018
1
Indels in VCF
#27 by haansi was closed Dec 14, 2018
1
Java error message when using own data
#26 by melnel000 was closed Oct 25, 2018
4
Mixture-Mode enhancement
#25 by haansi was closed Oct 16, 2018
@haansi
1
htsjdk.samtools.SAMException: Unable to find entry for contig: rCRS
#24 by williamrowell was closed Aug 31, 2018
5
Build failure with 'mvn install'
#20 by jpt1016 was closed Apr 20, 2018
1
Output variants in VCF enhancement
#19 by seppinho was closed Oct 25, 2018
10
SE Alignment does not give flags back
#17 by seppinho was closed Jan 15, 2021
report.html
#16 by scogi was closed Jan 12, 2018
@seppinho
Create Testcases for Heteroplasmy level
#15 by seppinho was closed Aug 8, 2017
@seppinho
Stats.txt file: Info what the numbers are
#14 by scogi was closed Feb 10, 2017
@seppinho
Add user-defined upload for reference sequence+locus annotation file
#13 by scogi was closed Aug 8, 2017
@seppinho
Replace variants.txt with annotate_out.txt and rename?
#12 by scogi was closed Feb 14, 2017
@seppinho
1
AAS annotation currently wrong bug
#11 by scogi was closed Feb 14, 2017
@lukfor
Integrate a button to download all results file of a job in one click enhancement
#10 by scogi was closed Jan 12, 2018
1
adapt screenshots in help page
#9 by scogi was closed Jan 12, 2018
@seppinho
remove rCRS from references
#8 by scogi was closed Aug 8, 2017
@seppinho
Naming of jobs enhancement
#7 by scogi was closed Aug 8, 2017
@lukfor
2
Share data buttons
#6 by scogi was closed Dec 19, 2016
1
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