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Commits on Mar 9, 2015

• Integer value

  shaman-narayanasamy

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  29d329d

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• python 2 backporting

  shaman-narayanasamy

  committed
  790de83

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Commits on Mar 4, 2015

• Bug fixes for reads >= 255:

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  voutcn

  committed
  06f84d5

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Commits on Jan 29, 2015

• Merge branch 'dev'

  voutcn

  committed
  021c346

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• amend changelog; fix --continue with --input-cmd

  voutcn

  committed
  3f4c93b

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• new README & v0.2.0 release

  voutcn

  committed
  d9510a1

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• fix "--num-cpu-threads" not recognized

  voutcn

  committed
  fcf9fc6

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• Merge pull request voutcn#13 from sebhtml/thread-option

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  voutcn

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• script: fix "megahit: option --num-cpu-threads not recognized"

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  Sébastien Boisvert

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  dc23908

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Commits on Jan 28, 2015

• Merge branch 'dev-continue-mode' into dev

  voutcn

  committed
  3ff0bf0

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• fix incorrect indent

  voutcn

  committed
  b97ae36

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Commits on Jan 27, 2015

• minor change in atomic bit vector -- use uint8 as a word, less conflicts in run-time?

  voutcn

  committed
  39b9635

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• - continue mode also work at the first run. suggested by https://github.com/voutcn/megahit/issues

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  voutcn

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  e248ce0

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Commits on Jan 24, 2015

• implement continue mode

  voutcn

  committed
  0d6e306

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• wrap options into a class

  voutcn

  committed
  80f8932

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Commits on Jan 22, 2015

• check builder existence after the parsing the opts; otherwise the CPU-only version always halts.

  voutcn

  committed
  1f1fc0e

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Commits on Jan 20, 2015

• Merge branch 'dev'

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  voutcn

  committed
  f7d66b5

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• tiny ammend for README

  voutcn

  committed
  3793ea0

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• new version number for release.

  voutcn

  committed
  57dab94

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• change max lv1 scan time to 64 (otherwise too slow); code cleaning in the python wrapper; check the binary sub-programs at the very beginning. Change version number 0.1.4 -> 0.2.0 as new api (--mem…

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  voutcn

  committed
  ebfaa32

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Commits on Dec 18, 2014

• typo bug

  voutcn

  committed
  a49b7b4

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Commits on Dec 14, 2014

• change to max_lv1_scan_time to 256

  voutcn

  committed
  194a652

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• moderate/minimum mme options; support mix of fastx input (by kseq.h)

  voutcn

  committed
  5579cc0

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Commits on Dec 13, 2014

• save some codes

  voutcn

  committed
  3799c24

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Commits on Dec 11, 2014

• bugfix

  voutcn

  committed
  e01b30f

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• test auto memory for kmer counting: lv1 scan ~8 times

  voutcn

  committed
  2c34a20

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• Merge branch 'omp_bugfix' into dev

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  voutcn

  committed
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Commits on Dec 8, 2014

• fix openmp evn issue

  voutcn

  committed
  00c5a21

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• merge

  voutcn

  committed
  47325af

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• prob with num_threads > omp_get_max_threads

  voutcn

  committed
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Commits on Dec 5, 2014

• Merge branch 'master' into dev

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  voutcn

  committed
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Commits on Dec 1, 2014

• put sub-programs in the root dir; check binaries in the wrapper

  voutcn

  committed
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• Merge pull request voutcn#9 from lgautier/patch-1

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  voutcn

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  97c677b

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• CXX is an implicitly defined variable

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  lgautier

  committed
  e4b4e66

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Commits on Nov 29, 2014

• dynamic memory allocation Change 1 - read sequences

  voutcn

  committed
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