Run revdep checks

Author: hadley

.Rbuildignore

@@ -9,3 +9,4 @@
 ^docs$
 ^cran-comments\.md$
 ^revdep$
+^\.httr-oauth$

.gitignore

@@ -18,3 +18,5 @@ vignettes/*.R
 /GTAGS
 /TAGS
 /.dir-locals.el
+revdep/checks
+revdep/library

revdep/.gitignore

@@ -1,2 +1,3 @@
 checks
 library
+data.sqlite

revdep/README.md

@@ -2,35 +2,36 @@
 
 |field    |value                        |
 |:--------|:----------------------------|
-|version  |R version 3.4.1 (2017-06-30) |
+|version  |R version 3.4.2 (2017-09-28) |
 |os       |macOS Sierra 10.12.6         |
 |system   |x86_64, darwin15.6.0         |
 |ui       |RStudio                      |
 |language |(EN)                         |
 |collate  |en_US.UTF-8                  |
 |tz       |America/Chicago              |
-|date     |2017-08-08                   |
+|date     |2017-11-03                   |
 
 # Dependencies
 
 |package    |old      |new        |Δ  |
 |:----------|:--------|:----------|:--|
 |dbplyr     |1.1.0    |1.1.0.9000 |*  |
 |assertthat |0.2.0    |0.2.0      |   |
-|BH         |1.62.0-1 |1.62.0-1   |   |
+|BH         |1.65.0-1 |1.65.0-1   |   |
 |bindr      |0.1      |0.1        |   |
 |bindrcpp   |0.2      |0.2        |   |
 |DBI        |0.7      |0.7        |   |
-|dplyr      |0.7.2    |0.7.2      |   |
-|glue       |1.1.1    |1.1.1      |   |
+|dplyr      |0.7.4    |0.7.4      |   |
+|glue       |1.2.0    |1.2.0      |   |
 |magrittr   |1.5      |1.5        |   |
 |pkgconfig  |2.0.1    |2.0.1      |   |
 |plogr      |0.1-1    |0.1-1      |   |
-|purrr      |0.2.3    |0.2.3      |   |
+|purrr      |0.2.4    |0.2.4      |   |
 |R6         |2.2.2    |2.2.2      |   |
-|Rcpp       |0.12.12  |0.12.12    |   |
-|rlang      |0.1.1    |0.1.1      |   |
-|tibble     |1.3.3    |1.3.3      |   |
+|Rcpp       |0.12.13  |0.12.13    |   |
+|rlang      |0.1.2    |0.1.2      |   |
+|tibble     |1.3.4    |1.3.4      |   |
+|tidyselect |NA       |0.2.2      |*  |
 
 # Revdeps
 
@@ -41,29 +42,42 @@
 |[grasp2db](problems.md#grasp2db)     |1.0.0   |1     |3       |4    |
 |[RSQLServer](problems.md#rsqlserver) |0.3.0   |1     |        |     |
 
-## All (23)
+## Broken (2)
+
+|package                                     |version |error |warning |note |
+|:-------------------------------------------|:-------|:-----|:-------|:----|
+|[Organism.dplyr](problems.md#organismdplyr) |1.2.2   |      |__+1__  |1    |
+|[replyr](problems.md#replyr)                |0.8.2   |      |__+1__  |1    |
+
+## All (29)
 
 |package                                              |version |error |warning |note |
 |:----------------------------------------------------|:-------|:-----|:-------|:----|
 |[bigrquery](problems.md#bigrquery)                   |0.4.1   |1     |        |     |
-|bikedata                                             |0.0.3   |-1    |        |     |
 |BiocFileCache                                        |1.0.1   |      |        |     |
 |chunked                                              |0.4     |      |        |     |
-|[dexter](problems.md#dexter)                         |0.4.2   |      |2       |1    |
-|[dplyr](problems.md#dplyr)                           |0.7.2   |      |        |1    |
-|etl                                                  |0.3.6   |      |        |     |
+|civis                                                |1.0.2   |      |        |     |
+|cytominer                                            |0.1.0   |      |        |     |
+|[dexter](problems.md#dexter)                         |0.5.1   |      |        |1    |
+|[dplyr](problems.md#dplyr)                           |0.7.4   |      |        |1    |
+|etl                                                  |0.3.7   |      |        |     |
 |[grasp2db](problems.md#grasp2db)                     |1.0.0   |1     |3       |4    |
 |[implyr](problems.md#implyr)                         |0.2.1   |1     |        |     |
-|infuser                                              |0.2.7   |      |        |     |
+|infuser                                              |0.2.8   |      |        |     |
+|[macleish](problems.md#macleish)                     |0.3.1   |      |        |1    |
 |[mdsr](problems.md#mdsr)                             |0.1.4   |      |        |3    |
 |[metagenomeFeatures](problems.md#metagenomefeatures) |1.8.1   |      |        |2    |
-|[MonetDBLite](problems.md#monetdblite)               |0.4.1   |      |        |1    |
-|[Organism.dplyr](problems.md#organism.dplyr)         |1.2.1   |      |        |1    |
+|[MonetDBLite](problems.md#monetdblite)               |0.4.1   |1     |        |1    |
+|nyctaxi                                              |0.0.1   |      |        |     |
+|[Organism.dplyr](problems.md#organismdplyr)          |1.2.2   |      |__+1__  |1    |
 |pleiades                                             |0.2.0   |      |        |     |
+|pool                                                 |0.1.2   |      |        |     |
+|poplite                                              |0.99.19 |      |        |     |
+|[replyr](problems.md#replyr)                         |0.8.2   |      |__+1__  |1    |
 |RPresto                                              |1.3.0   |      |        |     |
 |[RSQLServer](problems.md#rsqlserver)                 |0.3.0   |1     |        |     |
 |[sergeant](problems.md#sergeant)                     |0.5.2   |1     |        |     |
-|sparklyr                                             |0.6.1   |      |        |     |
+|sparklyr                                             |0.6.4   |-1    |        |     |
 |sqlscore                                             |0.1.2   |      |        |     |
 |srvyr                                                |0.2.2   |      |        |     |
 |[taxizedb](problems.md#taxizedb)                     |0.1.4   |1     |        |     |

revdep/email.yml

@@ -0,0 +1,4 @@
+release_date: Nov 13
+rel_release_date: 10 days
+my_news_url: https://github.com/tidyverse/dbplyr/blob/master/NEWS.md#dbplyr-1109000
+release_version: 1.2.0

revdep/problems.md

@@ -9,7 +9,6 @@ Version: 0.4.1
      ERROR
     Running the tests in ‘tests/testthat.R’ failed.
     Last 13 lines of output:
-      4. Failure: DBItest: Connection: disconnect_invalid_connection 
       5. Failure: DBItest: Connection: data_type_connection 
       6. Failure: DBItest: Connection: data_type_connection 
       7. Failure: DBItest: Connection: data_type_connection 
@@ -24,35 +23,23 @@ Version: 0.4.1
       3: Unused skip expressions: rows_affected 
       4: Unused skip expressions: read_only 
       Execution halted
+      Deleting test2668
     ```
 
 # dexter
 
-Version: 0.4.2
+Version: 0.5.1
 
 ## In both
 
-*   checking whether package ‘dexter’ can be installed ... WARNING
-    ```
-    Found the following significant warnings:
-      Warning: No Rd macros in package 'Rdpack'.
-    See ‘/Users/hadley/Documents/dplyr/dbplyr/revdep/checks/dexter/new/dexter.Rcheck/00install.out’ for details.
-    ```
-
-*   checking Rd files ... WARNING
-    ```
-    Warning: No Rd macros in package 'Rdpack'.
-    prepare_Rd: create3DC.Rd:65: unknown macro '\insertRef'
-    ```
-
 *   checking data for non-ASCII characters ... NOTE
     ```
       Note: found 109 marked UTF-8 strings
     ```
 
 # dplyr
 
-Version: 0.7.2
+Version: 0.7.4
 
 ## In both
 
@@ -153,6 +140,18 @@ Version: 0.2.1
       Execution halted
     ```
 
+# macleish
+
+Version: 0.3.1
+
+## In both
+
+*   checking dependencies in R code ... NOTE
+    ```
+    Namespace in Imports field not imported from: ‘DBI’
+      All declared Imports should be used.
+    ```
+
 # mdsr
 
 Version: 0.1.4
@@ -213,16 +212,50 @@ Version: 0.4.1
 
 ## In both
 
+*   checking tests ...
+    ```
+     ERROR
+    Running the tests in ‘tests/testthat.R’ failed.
+    Last 13 lines of output:
+      1: In .Internal(gc(verbose, reset)) :
+        Connection is garbage-collected, use dbDisconnect() to avoid this.
+      2: In .Internal(gc(verbose, reset)) :
+        Connection is garbage-collected, use dbDisconnect() to avoid this.
+      3: In .Internal(gc(verbose, reset)) :
+        Connection is garbage-collected, use dbDisconnect() to avoid this.
+      4: In .Internal(gc(verbose, reset)) :
+        Connection is garbage-collected, use dbDisconnect() to avoid this.
+      5: In .Internal(gc(verbose, reset)) :
+        Connection is garbage-collected, use dbDisconnect() to avoid this.
+      6: Connection is garbage-collected, use dbDisconnect() to avoid this. 
+      7: Connection is garbage-collected, use dbDisconnect() to avoid this. 
+      8: In .Internal(gc(verbose, reset)) :
+        Connection is garbage-collected, use dbDisconnect() to avoid this.
+      Execution halted
+    ```
+
 *   checking installed package size ... NOTE
     ```
-      installed size is  5.3Mb
+      installed size is  5.4Mb
       sub-directories of 1Mb or more:
         libs   5.1Mb
     ```
 
 # Organism.dplyr
 
-Version: 1.2.1
+Version: 1.2.2
+
+## Newly broken
+
+*   checking re-building of vignette outputs ... WARNING
+    ```
+    Error in re-building vignettes:
+      ...
+    Quitting from lines 134-151 (Organism.dplyr.Rmd) 
+    Error: processing vignette 'Organism.dplyr.Rmd' failed with diagnostics:
+    no applicable method for 'groups' applied to an object of class "c('sql', 'character')"
+    Execution halted
+    ```
 
 ## In both
 
@@ -236,6 +269,31 @@ Version: 1.2.1
       See the note in ?`:::` about the use of this operator.
     ```
 
+# replyr
+
+Version: 0.8.2
+
+## Newly broken
+
+*   checking re-building of vignette outputs ... WARNING
+    ```
+    Error in re-building vignettes:
+      ...
+    Quitting from lines 151-159 (DependencySorting.Rmd) 
+    Error: processing vignette 'DependencySorting.Rmd' failed with diagnostics:
+    missing value where TRUE/FALSE needed
+    Execution halted
+    ```
+
+## In both
+
+*   checking dependencies in R code ... NOTE
+    ```
+    Namespaces in Imports field not imported from:
+      ‘RSQLite’ ‘dbplyr’
+      All declared Imports should be used.
+    ```
+
 # RSQLServer
 
 Version: 0.3.0
@@ -325,11 +383,11 @@ Version: 0.1.4
      ERROR
     Running the tests in ‘tests/test-all.R’ failed.
     Last 13 lines of output:
-      1. Failure: db_load fails as expected - more (@test-db_load.R#33) --------------
+      [31m1. Failure: db_load fails as expected - more (@test-db_load.R#33) [39m--------------
       suppressMessages(db_load_col(path = f)) did not throw an error.
       
       
-      2. Failure: src fails well (@test-src.R#16) ------------------------------------
+      [31m2. Failure: src fails well (@test-src.R#16) [39m------------------------------------
       src_col() did not throw an error.