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20 stars written in R
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📊 Circular and Rectangular Manhattan Plot

R 570 115 Updated Apr 8, 2025

R package for microbiome biomarker discovery

R 183 41 Updated Feb 19, 2025
R 81 16 Updated Apr 11, 2025

Pairwise multilevel comparison using adonis

R 76 25 Updated Jun 2, 2023

BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts

R 67 21 Updated Mar 23, 2025

RADseq workflow using STACKS

R 57 27 Updated May 20, 2025

Tutorial on using popular tools for learning about population history

R 50 15 Updated Jul 18, 2018

Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates a consensus tree. It plots the maximum likelihood tree with…

R 34 1 Updated Mar 7, 2024

Scripts for population genetics analysis

R 20 4 Updated Nov 10, 2022

Utilities for community ecology analysis

R 18 3 Updated Oct 2, 2020

An R package to generate species range maps based on ecoregions and a user-friendly GBIF wrapper

R 17 1 Updated Apr 14, 2025

An R function to compute Concordance Factors from SNP datasets

R 13 1 Updated Nov 28, 2024

Continuous mapping of genetic diversity

R 13 Updated Apr 25, 2025
R 11 Updated May 17, 2024
R 6 2 Updated Jun 6, 2019

Venn-like representations of overlap between groups

R 4 Updated Jun 18, 2018

Sharing code for papers at BIO genetics group

R 4 1 Updated Apr 27, 2016

TOAST Software

R 3 2 Updated Apr 28, 2025

DIYABCskylineplot: A suite of R scripts to perform a Approximate Bayesian Computation Skyline Plot

R 3 1 Updated Jun 13, 2017

A short R script to calculate the Reich-Patterson FST estimator (Reich et al. 2009) and bootstraps from a genlight object.

R 2 Updated Oct 24, 2024