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20 stars written in R
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📊 Circular and Rectangular Manhattan Plot

R 543 114 Updated May 20, 2024

R package for microbiome biomarker discovery

R 171 40 Updated Nov 4, 2023

Pairwise multilevel comparison using adonis

R 72 24 Updated Jun 2, 2023

BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts

R 61 21 Updated Oct 14, 2024

RADseq workflow using STACKS

R 57 27 Updated Dec 12, 2024

Tutorial on using popular tools for learning about population history

R 49 15 Updated Jul 18, 2018

Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates a consensus tree. It plots the maximum likelihood tree with…

R 30 1 Updated Mar 7, 2024

stackr: an R package to run stacks software pipeline

R 29 8 Updated Nov 5, 2020

Scripts for population genetics analysis

R 19 4 Updated Nov 10, 2022

Utilities for community ecology analysis

R 18 3 Updated Oct 2, 2020

An R package to generate species range maps based on ecoregions and a user-friendly GBIF wrapper

R 16 1 Updated Jan 16, 2025

An R function to compute Concordance Factors from SNP datasets

R 13 1 Updated Nov 28, 2024

Continuous mapping of genetic diversity

R 12 Updated May 17, 2024
R 11 Updated May 17, 2024
R 6 2 Updated Jun 6, 2019

TOAST Software

R 3 2 Updated Dec 19, 2024

Venn-like representations of overlap between groups

R 3 Updated Jun 18, 2018

DIYABCskylineplot: A suite of R scripts to perform a Approximate Bayesian Computation Skyline Plot

R 3 1 Updated Jun 13, 2017

A short R script to calculate the Reich-Patterson FST estimator (Reich et al. 2009) and bootstraps from a genlight object.

R 2 Updated Oct 24, 2024