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MD

9 repositories

Fortran and Python examples to accompany the book "Computer Simulation of Liquids" by Michael P. Allen and Dominic J. Tildesley (2nd edition, Oxford University Press, 2017). Use the "Code" button, …

Fortran 301 103 Updated Aug 22, 2024

Data and code for graph neural network accelerated molecular dynamics

Jupyter Notebook 33 10 Updated Feb 15, 2022

Best Practices article intended for LiveCoMS

TeX 36 5 Updated Dec 17, 2019

A document for the Living Journal of Computational Molecular Science (LiveCoMS) which describes basic training for molecular simulations (oriented towards molecular dynamics (MD)), providing some t…

TeX 109 19 Updated Dec 29, 2018

Deep learning for molecules and materials book

Jupyter Notebook 609 120 Updated Jul 2, 2023

Quantum Mechanical Bespoke Force Field Derivation Toolkit

Python 94 30 Updated Jul 5, 2024

The SHARC molecular dynamics (MD) program suite is an ab initio MD software package developed to study the excited-state dynamics of molecules.

Python 66 36 Updated Oct 11, 2024

A general cross-platform tool for preparing simulations of molecules and complex molecular assemblies

Python 251 98 Updated Aug 11, 2024

Python-based library for easy force-field fitting

Python 5 5 Updated Aug 20, 2024