Bioinformatics
Official git repository for Biopython (originally converted from CVS)
pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
Comprehensive analysis of small RNA sequencing data
The Molecular Human – A Roadmap of Molecular Interactions Linking Multiomics Networks with Disease Endpoints.
Python library for large-scale targeted metabolomics.
Materials for short, half-day workshops
Hone computational biology skills by re-enacting Figure 1 of modern biology papers
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessible.