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proteinfold

8 repositories

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

Python 2,754 528 Updated Jul 23, 2024

Making Protein folding accessible to all!

Jupyter Notebook 1,920 482 Updated Oct 15, 2024

ColabFold on your local PC

Python 575 128 Updated Oct 16, 2024

Protein 3D structure prediction pipeline

Nextflow 53 36 Updated Oct 15, 2024

Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting multiple structures

Python 140 44 Updated Feb 25, 2024

Open source code for AlphaFold.

Python 12,587 2,232 Updated Jun 27, 2024

Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile

Python 62 Updated Aug 26, 2024

Predict the binding affinity of protein-protein complexes from structural data

Python 109 26 Updated Oct 14, 2024