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Commits on Aug 23, 2024

• Removed DS_Store file.

  pcarbo

  committed
  ba8427e

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• Merge pull request #27 from stephenslab/eweine/add_subset_option

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  pcarbo

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Commits on Aug 22, 2024

• added additional check in subset method

  

  Eric Weine

  committed
  49ebe86

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Commits on Aug 4, 2024

• added option for number of projection iterations

  

  Eric Weine

  committed
  c6f9b4f

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Commits on Aug 1, 2024

• made code more memory efficient

  

  Eric Weine

  committed
  681e5c1

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• fixed bug in projection method

  

  Eric Weine

  committed
  7222d45

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• Merge pull request #26 from stephenslab/eweine/change_warning

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  eweine

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• changed cat to message

  

  Eric Weine

  committed
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Commits on Jul 29, 2024

• Re-built the pkgdown site.

  pcarbo

  committed
  7086772

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• changed warning to a message

  

  Eric Weine

  committed
  00f5f75

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• removed projection script

  

  Eric Weine

  committed
  5c42575

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• added test code

  

  Eric Weine

  committed
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Commits on Jul 24, 2024

• added initial commit of projection

  

  Eric Weine

  committed
  7c27e4e

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• changed warning for convergence

  

  Eric Weine

  committed
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Commits on Jun 26, 2024

• Bumped up version.

  pcarbo

  committed
  a7213b4

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• Merge pull request #24 from stephenslab/eweine/add_dgTmatrix

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  pcarbo

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Commits on Jun 24, 2024

• added tests to confirm that different sparse matrix subclasses give the same results

  

  Eric Weine

  committed
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Commits on May 30, 2024

• Created script pca_pbmc_better.R to produce a better PCA plot for Fig. 1C.

  pcarbo

  committed
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Commits on Mar 11, 2024

• updated to more general sparse matrix class

  

  Eric Weine

  committed
  9877da0

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• added support for dgTmatrix

  

  Eric Weine

  committed
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Commits on Mar 8, 2024

• Small fix to the compute_pbmc_cellwise_logliks.R analysis script.

  pcarbo

  committed
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Commits on Mar 7, 2024

• Updated compute_pbmc_cellwise_logliks.R analysis script.

  pcarbo

  committed
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Commits on Mar 4, 2024

• Added analysis script compute_droplet_cellwise_logliks.R.

  pcarbo

  committed
  66c8099

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• added code to calculate time until better

  

  Eric Weine

  committed
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Commits on Mar 1, 2024

• A few small fixes to an analysis script.

  pcarbo

  committed
  d30ad71

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• Made a few improvements to the examine_droplet_logliks.R analysis.

  pcarbo

  committed
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Commits on Feb 29, 2024

• Revised the functions in inst/code/loglik.R so that they output the log-rates.

  pcarbo

  committed
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• I have a first draft of check_loglik_calcs.R

  pcarbo

  committed
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• Working on inst/analysis/check_loglik_calcs.R script.

  pcarbo

  committed
  83b5d88

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Commits on Feb 2, 2024

• Fixed a couple typos in the roxygen2 docs.

  pcarbo

  committed
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Commits on Jan 31, 2024

• A few more small fixes to tsne_droplet.R.

  pcarbo

  committed
  c1c33e7

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• Small fix to tsne_droplet.R.

  pcarbo

  committed
  4f60493

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• Improved the tsne_droplet.R analysis script.

  pcarbo

  committed
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Commits on Jan 30, 2024

• Fixed typo in roxygen2 docs.

  pcarbo

  committed
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Commits on Jan 28, 2024

• Merge pull request #23 from stephenslab/eweine/update_main_fig

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