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ref.sh
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gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.dbsnp138.vcf ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.dbsnp138.vcf.idx ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Mills_and_1000G_gold_standard.indels.hg38.vcf.gz ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Mills_and_1000G_gold_standard.indels.hg38.vcf.gz.tbi ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.known_indels.vcf.gz ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.known_indels.vcf.gz.tbi ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.dict ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.fai ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.alt ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.sa ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.amb ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.bwt ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.ann ./inputs/references/ &
gsutil cp gs://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.pac ./inputs/references/ &