From fce4677faf23d95875b6f64f5e7cb95ee373c8cf Mon Sep 17 00:00:00 2001
From: JiaweiChenGo <49065988+JiaweiChenGo@users.noreply.github.com>
Date: Tue, 20 Jun 2023 17:28:46 +0800
Subject: [PATCH] Add files via upload

---
 tosica.yaml | 165 ++++++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 165 insertions(+)
 create mode 100644 tosica.yaml

diff --git a/tosica.yaml b/tosica.yaml
new file mode 100644
index 0000000..c614f39
--- /dev/null
+++ b/tosica.yaml
@@ -0,0 +1,165 @@
+name: test_tosica
+channels:
+  - pytorch
+  - conda-forge
+  - bioconda
+  - r
+  - defaults
+dependencies:
+  - _libgcc_mutex=0.1=conda_forge
+  - _openmp_mutex=4.5=2_gnu
+  - anndata=0.9.1=pyhd8ed1ab_0
+  - blas=1.0=mkl
+  - brotli=1.0.9=h166bdaf_8
+  - brotli-bin=1.0.9=h166bdaf_8
+  - bzip2=1.0.8=h7f98852_4
+  - c-ares=1.19.1=hd590300_0
+  - ca-certificates=2023.5.7=hbcca054_0
+  - cached-property=1.5.2=hd8ed1ab_1
+  - cached_property=1.5.2=pyha770c72_1
+  - certifi=2023.5.7=pyhd8ed1ab_0
+  - charset-normalizer=3.1.0=pyhd8ed1ab_0
+  - colorama=0.4.6=pyhd8ed1ab_0
+  - contourpy=1.1.0=py38h7f3f72f_0
+  - cudatoolkit=10.1.243=h8cb64d8_11
+  - cycler=0.11.0=pyhd8ed1ab_0
+  - fonttools=4.40.0=py38h01eb140_0
+  - freetype=2.12.1=hca18f0e_1
+  - hdf5=1.14.0=nompi_hb72d44e_103
+  - icu=72.1=hcb278e6_0
+  - idna=3.4=pyhd8ed1ab_0
+  - importlib-metadata=6.7.0=pyha770c72_0
+  - importlib-resources=5.12.0=pyhd8ed1ab_0
+  - importlib_metadata=6.7.0=hd8ed1ab_0
+  - importlib_resources=5.12.0=pyhd8ed1ab_0
+  - intel-openmp=2022.1.0=h9e868ea_3769
+  - joblib=1.2.0=pyhd8ed1ab_0
+  - jpeg=9b=h024ee3a_2
+  - keyutils=1.6.1=h166bdaf_0
+  - kiwisolver=1.4.4=py38h43d8883_1
+  - krb5=1.20.1=h81ceb04_0
+  - lcms2=2.12=h3be6417_0
+  - ld_impl_linux-64=2.40=h41732ed_0
+  - lerc=4.0.0=h27087fc_0
+  - libaec=1.0.6=hcb278e6_1
+  - libblas=3.9.0=16_linux64_mkl
+  - libbrotlicommon=1.0.9=h166bdaf_8
+  - libbrotlidec=1.0.9=h166bdaf_8
+  - libbrotlienc=1.0.9=h166bdaf_8
+  - libcblas=3.9.0=16_linux64_mkl
+  - libcurl=7.88.1=hdc1c0ab_0
+  - libdeflate=1.18=h0b41bf4_0
+  - libedit=3.1.20191231=he28a2e2_2
+  - libev=4.33=h516909a_1
+  - libffi=3.4.2=h7f98852_5
+  - libgcc-ng=13.1.0=he5830b7_0
+  - libgfortran-ng=13.1.0=h69a702a_0
+  - libgfortran5=13.1.0=h15d22d2_0
+  - libgomp=13.1.0=he5830b7_0
+  - libhwloc=2.9.1=nocuda_h7313eea_6
+  - libiconv=1.17=h166bdaf_0
+  - libjpeg-turbo=2.1.4=h166bdaf_0
+  - liblapack=3.9.0=16_linux64_mkl
+  - libllvm11=11.1.0=he0ac6c6_5
+  - libllvm14=14.0.6=hcd5def8_3
+  - libnghttp2=1.52.0=h61bc06f_0
+  - libnsl=2.0.0=h7f98852_0
+  - libopenblas=0.3.23=pthreads_h80387f5_0
+  - libpng=1.6.39=h753d276_0
+  - libsqlite=3.42.0=h2797004_0
+  - libssh2=1.11.0=h0841786_0
+  - libstdcxx-ng=13.1.0=hfd8a6a1_0
+  - libtiff=4.2.0=h85742a9_0
+  - libuuid=2.38.1=h0b41bf4_0
+  - libuv=1.44.2=h166bdaf_0
+  - libwebp-base=1.3.0=h0b41bf4_0
+  - libxcb=1.15=h0b41bf4_0
+  - libxml2=2.11.4=h0d562d8_0
+  - libzlib=1.2.13=hd590300_5
+  - llvmlite=0.38.1=py38h38d86a4_0
+  - lz4-c=1.9.3=h9c3ff4c_1
+  - matplotlib-base=3.7.1=py38hd6c3c57_0
+  - mkl=2022.1.0=hc2b9512_224
+  - munkres=1.1.4=pyh9f0ad1d_0
+  - natsort=8.3.1=pyhd8ed1ab_0
+  - ncurses=6.4=hcb278e6_0
+  - networkx=3.1=pyhd8ed1ab_0
+  - ninja=1.11.1=h924138e_0
+  - numba=0.55.2=py38hdc3674a_0
+  - numpy=1.22.4=py38h99721a1_0
+  - olefile=0.46=pyh9f0ad1d_1
+  - openjpeg=2.4.0=hb52868f_1
+  - openssl=3.1.1=hd590300_1
+  - packaging=23.1=pyhd8ed1ab_0
+  - pandas=2.0.2=py38h01efb38_0
+  - patsy=0.5.3=pyhd8ed1ab_0
+  - pillow=8.3.1=py38h2c7a002_0
+  - pip=23.1.2=pyhd8ed1ab_0
+  - platformdirs=3.6.0=pyhd8ed1ab_0
+  - pooch=1.7.0=pyha770c72_3
+  - pthread-stubs=0.4=h36c2ea0_1001
+  - pynndescent=0.5.10=pyh1a96a4e_0
+  - pyparsing=3.1.0=pyhd8ed1ab_0
+  - pysocks=1.7.1=pyha2e5f31_6
+  - python=3.8.17=he550d4f_0_cpython
+  - python-dateutil=2.8.2=pyhd8ed1ab_0
+  - python-tzdata=2023.3=pyhd8ed1ab_0
+  - python_abi=3.8=3_cp38
+  - pytorch=1.7.1=py3.8_cuda10.1.243_cudnn7.6.3_0
+  - pytz=2023.3=pyhd8ed1ab_0
+  - readline=8.2=h8228510_1
+  - requests=2.31.0=pyhd8ed1ab_0
+  - scanpy=1.9.3=pyhd8ed1ab_0
+  - scikit-learn=1.2.2=py38hc099248_2
+  - scipy=1.10.1=py38h59b608b_3
+  - seaborn=0.12.2=hd8ed1ab_0
+  - seaborn-base=0.12.2=pyhd8ed1ab_0
+  - session-info=1.0.0=pyhd8ed1ab_0
+  - setuptools=67.7.2=pyhd8ed1ab_0
+  - six=1.16.0=pyh6c4a22f_0
+  - statsmodels=0.14.0=py38h31356c5_1
+  - stdlib-list=0.8.0=pyhd8ed1ab_0
+  - tbb=2021.9.0=hf52228f_0
+  - threadpoolctl=3.1.0=pyh8a188c0_0
+  - tk=8.6.12=h27826a3_0
+  - torchaudio=0.7.2=py38
+  - torchvision=0.8.2=py38_cu101
+  - tqdm=4.65.0=pyhd8ed1ab_1
+  - typing-extensions=4.6.3=hd8ed1ab_0
+  - typing_extensions=4.6.3=pyha770c72_0
+  - umap-learn=0.5.3=py38h578d9bd_1
+  - unicodedata2=15.0.0=py38h0a891b7_0
+  - urllib3=2.0.3=pyhd8ed1ab_0
+  - wheel=0.40.0=pyhd8ed1ab_0
+  - xorg-libxau=1.0.11=hd590300_0
+  - xorg-libxdmcp=1.1.3=h7f98852_0
+  - xz=5.2.6=h166bdaf_0
+  - zipp=3.15.0=pyhd8ed1ab_0
+  - zlib=1.2.13=hd590300_5
+  - zstd=1.4.9=ha95c52a_0
+  - pip:
+      - absl-py==1.4.0
+      - cachetools==4.2.4
+      - einops==0.6.1
+      - google-auth==1.35.0
+      - google-auth-oauthlib==0.4.6
+      - grpcio==1.54.2
+      - h5py==3.4.0
+      - igraph==0.10.4
+      - louvain==0.8.0
+      - markdown==3.4.3
+      - markupsafe==2.1.3
+      - oauthlib==3.2.2
+      - protobuf==3.17.2
+      - pyasn1==0.5.0
+      - pyasn1-modules==0.3.0
+      - pydot==1.4.2
+      - requests-oauthlib==1.3.1
+      - rsa==4.9
+      - tensorboard==2.6.0
+      - tensorboard-data-server==0.6.1
+      - tensorboard-plugin-wit==1.8.1
+      - texttable==1.6.7
+      - tosica==1.0.0
+      - werkzeug==2.3.6
+prefix: /lustre2/jdhan_pkuhpc/chenjw/apps/conda/envs/test_tosica