From 219ad5c540e9aff0e1664bdf63b68b37ad4eb1cb Mon Sep 17 00:00:00 2001 From: GitHub Actions Date: Sat, 7 Dec 2024 12:13:33 +0000 Subject: [PATCH] [status] 2024-12-07 12:13:33 UTC --- README.md | 26 +++++++++++++------------- index.html | 32 ++++++++++++++++---------------- repos.csv | 29 ++++++++++++----------------- 3 files changed, 41 insertions(+), 46 deletions(-) diff --git a/README.md b/README.md index dea10ff..2c12fac 100644 --- a/README.md +++ b/README.md @@ -2,18 +2,18 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-12-06 12:11:18 UTC +2024-12-07 12:11:18 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 792 | 19 | 73 | 190 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292800) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292810) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292801) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292802) | 343c7e | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 793 | 19 | 73 | 190 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292800) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292810) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292801) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292802) | 343c7e | | [theislab/scvelo](https://github.com/theislab/scvelo) | 419 | 13 | 62 | 103 | [![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/11127835313) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/11127835314) | 22b6e7 | | [theislab/scvelo](https://github.com/theislab/scvelo) | 419 | 13 | 62 | 103 | [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) | b2f31b | | [theislab/cellrank](https://github.com/theislab/cellrank) | 353 | 8 | 22 | 46 | [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/10872921434) | b5e993 | -| [theislab/scib](https://github.com/theislab/scib) | 314 | 14 | 41 | 63 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/12184255455) | d35727 | -| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 275 | 14 | 34 | 31 | [![](https://github.com/theislab/single-cell-transformer-papers/workflows/Document%20Generation/badge.svg)](https://github.com/theislab/single-cell-transformer-papers/actions/runs/12121943778) | e775ed | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 240 | 5 | 44 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/12135789991) | 2e8240 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 240 | 5 | 44 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/12115165279) | c4721f | +| [theislab/scib](https://github.com/theislab/scib) | 315 | 14 | 41 | 63 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/12184255455) | d35727 | +| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 275 | 14 | 35 | 31 | [![](https://github.com/theislab/single-cell-transformer-papers/workflows/Document%20Generation/badge.svg)](https://github.com/theislab/single-cell-transformer-papers/actions/runs/12121943778) | e775ed | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 240 | 5 | 42 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/12198786686) | 27852f | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 240 | 5 | 42 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/12115165279) | c4721f | | [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 152 | 5 | 13 | 28 | [![](https://github.com/theislab/zellkonverter/workflows/.github/workflows/check-bioc.yml/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/12134366548) | 26f413 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 135 | 8 | 167 | 11 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/9457340256) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 135 | 8 | 167 | 11 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | @@ -22,7 +22,7 @@ GitHub Dashboard | [theislab/moscot](https://github.com/theislab/moscot) | 118 | 3 | 40 | 9 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/10212768708) | 36d93b | | [theislab/ncem](https://github.com/theislab/ncem) | 103 | 6 | 28 | 13 | [![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) | d03a07 | | [theislab/graphcompass](https://github.com/theislab/graphcompass) | 34 | 2 | 1 | 0 | [![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) | 7c4551 | -| [theislab/spapros](https://github.com/theislab/spapros) | 30 | 3 | 11 | 7 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/11988703697) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/12191239956) | 1ec08e | +| [theislab/spapros](https://github.com/theislab/spapros) | 30 | 3 | 11 | 7 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/11988703697) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/12208736403) | 1ec08e | | [theislab/spapros](https://github.com/theislab/spapros) | 30 | 3 | 11 | 7 | [![](https://github.com/theislab/spapros/workflows/Build%20spapros%20Package/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589767) [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589776) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589778) [![](https://github.com/theislab/spapros/workflows/Run%20spapros%20Tests/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589764) | 2f6c1a | | [theislab/mubind](https://github.com/theislab/mubind) | 28 | 3 | 29 | 0 | [![](https://github.com/theislab/mubind/workflows/Python%20package/badge.svg)](https://github.com/theislab/mubind/actions/runs/10632591185) | 3f62f8 | | [theislab/hadge](https://github.com/theislab/hadge) | 24 | 3 | 14 | 6 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) | 1ed105 | @@ -34,7 +34,7 @@ GitHub Dashboard | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 6 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/8356857136) | e441a5 | | [theislab/ehrdata](https://github.com/theislab/ehrdata) | 5 | 2 | 19 | 1 | [![](https://github.com/theislab/ehrdata/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/12155030309) [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/12155030299) | e06ea3 | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 3 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/12198441337) | c141ab | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 3 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/12212689496) | ac898c | | [theislab/spatialdata-db](https://github.com/theislab/spatialdata-db) | 1 | 1 | 25 | 0 | [![](https://github.com/theislab/spatialdata-db/workflows/Check%20Build/badge.svg)](https://github.com/theislab/spatialdata-db/actions/runs/11362121634) [![](https://github.com/theislab/spatialdata-db/workflows/Test/badge.svg)](https://github.com/theislab/spatialdata-db/actions/runs/12102480774) | 5fc4ad | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Build%20idtrack%20Package/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702245) [![](https://github.com/theislab/idtrack/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702249) [![](https://github.com/theislab/idtrack/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702241) [![](https://github.com/theislab/idtrack/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702236) [![](https://github.com/theislab/idtrack/workflows/Run%20idtrack%20Tests/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702246) | ec9e9f | @@ -42,10 +42,10 @@ GitHub Dashboard | Repo | Stars | Subscribers | Issues | Forks | |:------------------------------------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:| -| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1411 | 30 | 21 | 463 | +| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1412 | 30 | 21 | 463 | | [theislab/scarches](https://github.com/theislab/scarches) | 339 | 12 | 53 | 51 | -| [theislab/scgen](https://github.com/theislab/scgen) | 270 | 9 | 28 | 56 | -| [theislab/dca](https://github.com/theislab/dca) | 250 | 11 | 32 | 71 | +| [theislab/scgen](https://github.com/theislab/scgen) | 271 | 9 | 28 | 56 | +| [theislab/dca](https://github.com/theislab/dca) | 251 | 11 | 32 | 71 | | [theislab/paga](https://github.com/theislab/paga) | 209 | 10 | 24 | 33 | | [theislab/diffxpy](https://github.com/theislab/diffxpy) | 193 | 7 | 108 | 23 | | [theislab/kBET](https://github.com/theislab/kBET) | 155 | 8 | 9 | 23 | @@ -67,12 +67,12 @@ GitHub Dashboard | [theislab/scvelo_notebooks](https://github.com/theislab/scvelo_notebooks) | 32 | 2 | 4 | 13 | | [theislab/deepflow](https://github.com/theislab/deepflow) | 31 | 5 | 1 | 14 | | [theislab/DeepRT](https://github.com/theislab/DeepRT) | 30 | 2 | 11 | 10 | -| [theislab/DRVI](https://github.com/theislab/DRVI) | 30 | 1 | 1 | 2 | +| [theislab/DRVI](https://github.com/theislab/DRVI) | 30 | 1 | 1 | 3 | | [theislab/batchglm](https://github.com/theislab/batchglm) | 27 | 3 | 47 | 9 | | [theislab/graph_abstraction](https://github.com/theislab/graph_abstraction) | 26 | 8 | 0 | 10 | | [theislab/prophet](https://github.com/theislab/prophet) | 26 | 5 | 2 | 2 | | [theislab/Covid_meta_analysis](https://github.com/theislab/Covid_meta_analysis) | 24 | 8 | 2 | 11 | -| [theislab/scgen-reproducibility](https://github.com/theislab/scgen-reproducibility) | 22 | 4 | 6 | 8 | +| [theislab/scgen-reproducibility](https://github.com/theislab/scgen-reproducibility) | 23 | 4 | 6 | 8 | | [theislab/interactive_plotting](https://github.com/theislab/interactive_plotting) | 21 | 4 | 11 | 7 | | [theislab/neural_organoid_atlas](https://github.com/theislab/neural_organoid_atlas) | 21 | 6 | 3 | 4 | | [theislab/multigrate](https://github.com/theislab/multigrate) | 16 | 3 | 7 | 6 | diff --git a/index.html b/index.html index 77bd2db..1970180 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@

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- + diff --git a/repos.csv b/repos.csv index 0c55cd2..d7b0136 100644 --- a/repos.csv +++ b/repos.csv @@ -12,7 +12,7 @@ theislab,2022_Tritschler_pancreas_cross_species,theislab/2022_Tritschler_pancrea theislab,AutoGeneS,theislab/AutoGeneS,57,6,6,8,FALSE,https://github.com/theislab/AutoGeneS,57,NA,NA,NA theislab,CFGen,theislab/CFGen,6,1,1,4,FALSE,https://github.com/theislab/CFGen,6,NA,NA,NA theislab,Covid_meta_analysis,theislab/Covid_meta_analysis,24,8,2,11,FALSE,https://github.com/theislab/Covid_meta_analysis,24,NA,NA,NA -theislab,DRVI,theislab/DRVI,30,1,1,2,FALSE,https://github.com/theislab/DRVI,30,NA,NA,NA +theislab,DRVI,theislab/DRVI,30,1,1,3,FALSE,https://github.com/theislab/DRVI,30,NA,NA,NA theislab,DRVI_reproducibility,theislab/DRVI_reproducibility,2,3,0,1,FALSE,https://github.com/theislab/DRVI_reproducibility,2,NA,NA,NA theislab,DeepCollisionalCrossSection,theislab/DeepCollisionalCrossSection,14,5,1,6,FALSE,https://github.com/theislab/DeepCollisionalCrossSection,14,NA,NA,NA theislab,DeepRT,theislab/DeepRT,30,2,11,10,FALSE,https://github.com/theislab/DeepRT,30,NA,NA,NA @@ -140,20 +140,15 @@ theislab,cpa,theislab/cpa,88,5,21,17,FALSE,https://github.com/theislab/cpa,88,NA theislab,cpa-reproducibility,theislab/cpa-reproducibility,7,2,1,1,FALSE,https://github.com/theislab/cpa-reproducibility,7,NA,NA,NA theislab,cross_system_integration,theislab/cross_system_integration,11,2,11,2,FALSE,https://github.com/theislab/cross_system_integration,11,NA,NA,NA theislab,dali,theislab/dali,0,7,0,1,FALSE,https://github.com/theislab/dali,0,NA,NA,NA -theislab,dca,theislab/dca,250,11,32,71,FALSE,https://github.com/theislab/dca,250,NA,NA,NA +theislab,dca,theislab/dca,251,11,32,71,FALSE,https://github.com/theislab/dca,251,NA,NA,NA theislab,deepflow,theislab/deepflow,31,5,1,14,FALSE,https://github.com/theislab/deepflow,31,NA,NA,NA theislab,destiny,theislab/destiny,78,5,31,11,FALSE,https://github.com/theislab/destiny,78,NA,NA,NA theislab,diffxpy,theislab/diffxpy,193,7,108,23,FALSE,https://github.com/theislab/diffxpy,193,NA,NA,NA theislab,diffxpy_tutorials,theislab/diffxpy_tutorials,10,8,4,2,FALSE,https://github.com/theislab/diffxpy_tutorials,10,NA,NA,NA theislab,disent,theislab/disent,6,3,0,0,FALSE,https://github.com/theislab/disent,6,NA,NA,NA theislab,edgepy,theislab/edgepy,0,3,0,0,FALSE,https://github.com/theislab/edgepy,0,NA,NA,NA -theislab,ehrapy,theislab/ehrapy,240,5,44,20,FALSE,https://github.com/theislab/ehrapy,240,2e8240f7e53ecfd479e4835d1aff9cd1f981a242,"[pre-commit.ci] pre-commit autoupdate (#833) - -updates: -- [github.com/astral-sh/ruff-pre-commit: v0.8.0 → v0.8.1](https://github.com/astral-sh/ruff-pre-commit/compare/v0.8.0...v0.8.1) - -Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/12135789991) -theislab,ehrapy,theislab/ehrapy,240,5,44,20,FALSE,https://github.com/theislab/ehrapy,240,c4721fb128532782c9af134029a70a5e42293f18,"0.10.0 release +theislab,ehrapy,theislab/ehrapy,240,5,42,20,FALSE,https://github.com/theislab/ehrapy,240,27852fa07e1dc8018fc4cab02c2ecf76812ac252,fix casting to float and test (#837),[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/12198786686) +theislab,ehrapy,theislab/ehrapy,240,5,42,20,FALSE,https://github.com/theislab/ehrapy,240,c4721fb128532782c9af134029a70a5e42293f18,"0.10.0 release Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/12115165279) theislab,ehrapy-cli,theislab/ehrapy-cli,1,3,0,0,FALSE,https://github.com/theislab/ehrapy-cli,1,NA,NA,NA @@ -210,7 +205,7 @@ theislab,gastrulation_analysis,theislab/gastrulation_analysis,10,4,0,1,FALSE,htt theislab,geome,theislab/geome,16,3,3,4,FALSE,https://github.com/theislab/geome,16,402a0a8cdb442fee8666416e5f163c4098fa0c07,"Merge pull request #55 from theislab/fix/toarray Fix Sparse "".A"" Not Found",[![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/10868284169) -theislab,gh-dashboard,theislab/gh-dashboard,3,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,3,c141abaebeeeb2f856a04d5b88cc5cde1ed93a42,[status] 2024-12-05 12:13:17 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/12198441337) +theislab,gh-dashboard,theislab/gh-dashboard,3,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,3,ac898cfba1589dbe0cf81c945ddaebc4f07aa115,[status] 2024-12-06 12:12:38 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/12212689496) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA theislab,graphcompass,theislab/graphcompass,34,2,1,0,FALSE,https://github.com/theislab/graphcompass,34,7c455146402592d7ba73173a72d2abc4d5f7737b,initial commit,[![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) theislab,greatpy,theislab/greatpy,9,3,4,0,FALSE,https://github.com/theislab/greatpy,9,NA,NA,NA @@ -296,9 +291,9 @@ Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.gi theislab,scarches,theislab/scarches,339,12,53,51,FALSE,https://github.com/theislab/scarches,339,NA,NA,NA theislab,scarches_notebooks,theislab/scarches_notebooks,0,3,0,0,FALSE,https://github.com/theislab/scarches_notebooks,0,NA,NA,NA theislab,scatac_poisson_reproducibility,theislab/scatac_poisson_reproducibility,9,3,0,0,FALSE,https://github.com/theislab/scatac_poisson_reproducibility,9,NA,NA,NA -theislab,scgen,theislab/scgen,270,9,28,56,FALSE,https://github.com/theislab/scgen,270,NA,NA,NA -theislab,scgen-reproducibility,theislab/scgen-reproducibility,22,4,6,8,FALSE,https://github.com/theislab/scgen-reproducibility,22,NA,NA,NA -theislab,scib,theislab/scib,314,14,41,63,FALSE,https://github.com/theislab/scib,NA,d35727305501f905424f19a0e95b61dcda61c460,"Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows (#415) +theislab,scgen,theislab/scgen,271,9,28,56,FALSE,https://github.com/theislab/scgen,271,NA,NA,NA +theislab,scgen-reproducibility,theislab/scgen-reproducibility,23,4,6,8,FALSE,https://github.com/theislab/scgen-reproducibility,23,NA,NA,NA +theislab,scib,theislab/scib,315,14,41,63,FALSE,https://github.com/theislab/scib,NA,d35727305501f905424f19a0e95b61dcda61c460,"Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows (#415) * Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows @@ -364,7 +359,7 @@ theislab,sfaira-site,theislab/sfaira-site,0,4,0,0,FALSE,https://github.com/theis theislab,sfaira_benchmarks,theislab/sfaira_benchmarks,0,3,0,0,FALSE,https://github.com/theislab/sfaira_benchmarks,0,NA,NA,NA theislab,sfaira_extension,theislab/sfaira_extension,0,3,1,0,FALSE,https://github.com/theislab/sfaira_extension,0,NA,NA,NA theislab,sfaira_tutorials,theislab/sfaira_tutorials,6,4,4,2,FALSE,https://github.com/theislab/sfaira_tutorials,6,NA,NA,NA -theislab,single-cell-best-practices,theislab/single-cell-best-practices,792,19,73,190,FALSE,https://github.com/theislab/single-cell-best-practices,792,343c7e0a9fa9dbe98283faba070cf1426dab71f3,"Fixed some typos (#303) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,793,19,73,190,FALSE,https://github.com/theislab/single-cell-best-practices,793,343c7e0a9fa9dbe98283faba070cf1426dab71f3,"Fixed some typos (#303) * fix additional ""does"" @@ -391,12 +386,12 @@ theislab,single-cell-best-practices,theislab/single-cell-best-practices,792,19,7 * fix typo * fix typo",[![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292800) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292810) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292801) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292802) -theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,275,14,34,31,FALSE,https://github.com/theislab/single-cell-transformer-papers,275,e775edd612406375ac851e957231f2ecf4c74fb2,add new entry instruction,[![](https://github.com/theislab/single-cell-transformer-papers/workflows/Document%20Generation/badge.svg)](https://github.com/theislab/single-cell-transformer-papers/actions/runs/12121943778) -theislab,single-cell-tutorial,theislab/single-cell-tutorial,1411,30,21,463,FALSE,https://github.com/theislab/single-cell-tutorial,1411,NA,NA,NA +theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,275,14,35,31,FALSE,https://github.com/theislab/single-cell-transformer-papers,275,e775edd612406375ac851e957231f2ecf4c74fb2,add new entry instruction,[![](https://github.com/theislab/single-cell-transformer-papers/workflows/Document%20Generation/badge.svg)](https://github.com/theislab/single-cell-transformer-papers/actions/runs/12121943778) +theislab,single-cell-tutorial,theislab/single-cell-tutorial,1412,30,21,463,FALSE,https://github.com/theislab/single-cell-tutorial,1412,NA,NA,NA theislab,singlecell_proteomics,theislab/singlecell_proteomics,5,5,6,3,FALSE,https://github.com/theislab/singlecell_proteomics,5,NA,NA,NA theislab,spapros,theislab/spapros,30,3,11,7,FALSE,https://github.com/theislab/spapros,30,1ec08e6809978021e7ad0d7b7ce4f5412f391f79,"Merge pull request #357 from theislab/scrinshot_probe_designer -adapter tutorials to new framework",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/11988703697) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/12191239956) +adapter tutorials to new framework",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/11988703697) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/12208736403) theislab,spapros,theislab/spapros,30,3,11,7,FALSE,https://github.com/theislab/spapros,30,2f6c1ad9fdab44d29017e268ef215d18278f56b9,prints for identifying mem issues,[![](https://github.com/theislab/spapros/workflows/Build%20spapros%20Package/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589767) [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589776) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589778) [![](https://github.com/theislab/spapros/workflows/Run%20spapros%20Tests/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589764) theislab,spapros-pipeline,theislab/spapros-pipeline,7,2,0,0,FALSE,https://github.com/theislab/spapros-pipeline,7,fe84cf66cf6cf9b8fb441c74d4c004c20d1003cf,Update readme to refer to spapros smk repo,[![](https://github.com/theislab/spapros-pipeline/workflows/Run%20Example/badge.svg)](https://github.com/theislab/spapros-pipeline/actions/runs/11988359512) theislab,spapros-smk,theislab/spapros-smk,0,2,0,1,FALSE,https://github.com/theislab/spapros-smk,0,NA,NA,NA
theislab/single-cell-best-practices792793 19 73 190
theislab/scib314315 14 41 63 theislab/single-cell-transformer-papers 275 143435 31 e775ed theislab/ehrapy 240 54442 202e824027852f
theislab/ehrapy 240 54442 20 c4721f 11 7 - 1ec08e
2 0 0c141abac898c
theislab/spatialdata-db
theislab/single-cell-tutorial14111412 30 21 463
theislab/scgen270271 9 28 56
theislab/dca250251 11 32 71 30 1 123
theislab/batchglm
theislab/scgen-reproducibility2223 4 6 8