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2024-12-10 12:11:33 UTC

Repo Stars Subscribers Issues Forks Status Commit
theislab/single-cell-best-practices 793 19 73 190 343c7e
theislab/scvelo 419 13 62 104 22b6e7
theislab/cellrank 354 8 22 47 82248b
theislab/cellrank 354 8 22 47 b5e993
theislab/scib 315 14 41 63 d35727
theislab/ehrapy 240 5 42 20 419f2b
theislab/ehrapy 240 5 42 20 c4721f
theislab/zellkonverter 154 5 13 28 8358a4
theislab/sfaira 135 8 167 11 55bcbb
theislab/sfaira 135 8 167 11 5fcf93
theislab/sfaira 135 8 167 11 ceb14c
theislab/moscot 118 3 40 9 36d93b
theislab/ncem 104 6 28 13 d03a07
theislab/graphcompass 34 2 1 0 7c4551
theislab/spapros 32 3 11 7 1ec08e
theislab/spapros 32 3 11 7 2f6c1a
theislab/mubind 28 3 29 0 3f62f8
theislab/hadge 24 3 14 6 1ed105
theislab/multimil 19 5 6 3 c721ba
theislab/geome 16 3 3 4 402a0a
theislab/scanpydoc 12 6 3 6 bf75f1
theislab/cellrank2_reproducibility 8 1 1 2 8020e7
theislab/moscot_notebooks 7 1 8 3 210765
theislab/spapros-pipeline 7 2 0 0 fe84cf
theislab/cellrank_notebooks 6 4 1 5 677784
theislab/ehrapy-datasets 6 2 0 2 e441a5
theislab/gh-dashboard 3 2 0 0 37b2ad
theislab/spatialdata-db 1 1 25 0 5fc4ad
theislab/idtrack 0 1 6 0 ec9e9f

Repos without Github Actions

Repo Stars Subscribers Issues Forks
theislab/single-cell-tutorial 1415 30 21 465
theislab/scarches 339 12 53 51
theislab/single-cell-transformer-papers 276 14 37 31
theislab/scgen 271 9 28 56
theislab/dca 251 11 32 71
theislab/paga 211 10 24 33
theislab/diffxpy 193 7 108 23
theislab/kBET 155 8 9 23
theislab/scCODA 152 9 8 24
theislab/sc-pert 145 5 6 13
theislab/anndata2ri 129 7 14 16
theislab/chemCPA 104 5 12 24
theislab/cpa 88 5 21 17
theislab/destiny 79 5 31 11
theislab/nicheformer 68 5 14 2
theislab/scib-pipeline 66 7 16 28
theislab/AutoGeneS 57 6 6 8
theislab/scib-reproducibility 55 6 4 13
theislab/trVAE 55 6 3 12
theislab/scTab 51 4 1 9
theislab/spatial_scog_workshop_2022 50 9 0 27
theislab/pseudodynamics 39 7 0 6
theislab/tcellmatch 37 9 3 7
theislab/scArches-reproducibility 33 4 5 0
theislab/scvelo_notebooks 32 2 4 13
theislab/deepflow 31 5 1 14
theislab/DRVI 31 1 1 3
theislab/DeepRT 30 2 11 10
theislab/batchglm 27 3 47 9
theislab/graph_abstraction 26 8 0 10
theislab/prophet 26 5 2 2
theislab/Covid_meta_analysis 24 8 2 11
theislab/scgen-reproducibility 23 4 6 9
theislab/neural_organoid_atlas 22 6 3 4
theislab/interactive_plotting 21 4 11 7
theislab/multigrate 16 3 7 6
theislab/campa 14 4 6 4
theislab/cellrank_reproducibility 14 2 1 8
theislab/DeepCollisionalCrossSection 14 5 1 6
theislab/inVAE 14 3 0 2
theislab/multicpa 13 2 1 2
theislab/scanpy-in-R 13 3 1 0
theislab/scPoli_reproduce 13 3 2 4
theislab/GWAS-scRNAseq-Integration 12 5 0 12
theislab/MetaMap 12 7 0 8
theislab/ncem_tutorials 12 4 6 0
theislab/cross_system_integration 11 2 11 2
theislab/moslin 11 1 0 1
theislab/diffxpy_tutorials 10 8 4 2
theislab/gastrulation_analysis 10 4 0 1
theislab/scAnalysisTutorial 10 3 0 3
theislab/superexacttestpy 10 2 3 0
theislab/enrichment_analysis_celltype 9 5 0 4
theislab/expiMap_reproducibility 9 5 3 4
theislab/greatpy 9 3 4 0
theislab/IMPA 9 2 1 0
theislab/scatac_poisson_reproducibility 9 3 0 0
theislab/trvaep 9 3 0 6
theislab/2020_Mayr 8 6 0 8
theislab/jump-cpg0016-segmentation 8 1 2 0
theislab/ncem_benchmarks 8 4 4 2
theislab/PathReg 8 3 0 0
theislab/sc-best-practices-ce 8 8 2 3
theislab/scachepy 8 5 3 1
theislab/scCODA_reproducibility 8 5 0 1
theislab/squidpy_reproducibility 8 2 0 7
theislab/tissue_tensorflow 8 3 0 0
theislab/2018_Angelidis 7 4 0 6
theislab/2019_Strunz 7 5 1 11
theislab/cpa-reproducibility 7 2 1 1
theislab/ehrapy-tutorials 7 3 0 1
theislab/mouse_cross-condition_pancreatic_islet_atlas 7 2 0 4
theislab/CFGen 6 1 1 4
theislab/disent 6 3 0 0
theislab/intercode 6 3 1 1
theislab/multimil_reproducibility 6 3 4 1
theislab/pancreatic-endocrinogenesis 6 3 0 7
theislab/sfaira_tutorials 6 4 4 2
theislab/theislab.github.io 6 2 9 0
theislab/trVAE_reproducibility 6 3 2 7
theislab/atlas-feature-selection-benchmark 5 2 0 0
theislab/ehrdata 5 2 19 1
theislab/flowVI 5 3 0 0
theislab/InterpretableAutoencoders 5 4 0 0
theislab/kbranches 5 7 0 0
theislab/scanpy-demo-czbiohub 5 5 0 5
theislab/singlecell_proteomics 5 5 6 3
theislab/ssl_in_scg 5 1 0 1
theislab/2022_Tritschler_pancreas_cross_species 4 3 0 1
theislab/archmap 4 2 3 0
theislab/covid-perturbation 4 3 0 0
theislab/feature-attribution-sc 4 2 8 1
theislab/LODE 4 2 9 0
theislab/perturbation-metrics 4 2 1 0
theislab/task-dge-perturbation-prediction-analysis 4 2 0 1
theislab/cellrank_reproducibility_preprint 3 2 0 0
theislab/extended-single-cell-best-practices-container 3 4 2 1
theislab/moscot-framework_reproducibility 3 2 2 0
theislab/moscot_not 3 2 8 1
theislab/multigrate_reproducibility 3 1 0 0
theislab/multires-consensus-clustering 3 4 9 0
theislab/nbconvertR 3 3 1 2
theislab/sc_analysis_template 3 3 0 0
theislab/spatial_atlas_ssl 3 2 0 0
theislab/svaeligr 3 3 0 0
theislab/txsim 3 2 40 0
theislab/2020_iPS_Lung_Differentiation 2 5 0 2
theislab/2021_Aliluev_Tritschler_gut_HFD 2 4 0 1
theislab/bartseq-pipeline 2 4 0 3
theislab/campa_ana 2 4 0 0
theislab/covid_macrophages_integration 2 5 0 5
theislab/DRVI_reproducibility 2 3 0 1
theislab/ehrapy-reproducibility 2 1 1 0
theislab/epicardiods_analysis 2 2 1 0
theislab/flexible_priors 2 2 0 0
theislab/gut_lineage 2 3 0 3
theislab/HPA_reproducibility 2 3 0 1
theislab/HRCA-reproducibility 2 4 0 1
theislab/interaction-tools 2 4 0 0
theislab/LineagePulse 2 5 0 0
theislab/LungInjuryRegeneration 2 8 0 0
theislab/masterpraktikum_ssl_segmentation 2 3 0 2
theislab/moscot_benchmarks 2 2 1 0
theislab/scanpy_squidpy_demo_2021 2 4 0 1
theislab/scPoli_legacy 2 5 0 0
theislab/tissue 2 3 0 0
theislab/2021_PRMT7_regulates_Monocyte_Extravasation 1 4 0 2
theislab/archmap_data 1 0 2 0
theislab/astrocytes_reprogramming_analysis 1 5 0 0
theislab/augurpy 1 2 10 0
theislab/autoencoderPS 1 3 0 2
theislab/bartSeq 1 5 1 5
theislab/bindome 1 3 5 1
theislab/countae 1 4 0 0
theislab/ehrapy-cli 1 3 0 0
theislab/ehrapy-site 1 2 0 0
theislab/ifcseq 1 3 0 1
theislab/MS_mv_modelling 1 2 0 1
theislab/pertpy-reproducibility 1 2 0 1
theislab/sc_mae 1 2 0 0
theislab/spapros_reproducibility 1 1 0 1
theislab/tardis 1 1 0 2
theislab/tissue_reproducibility 1 3 0 0
theislab/transcription_factor_activity 1 1 5 1
theislab/unbalanced_monge_maps_single_cell 1 1 0 0
theislab/zebrafish_bipolarity 1 4 0 1
theislab/2015-grn-inference 0 2 0 0
theislab/2020_Inhibition_LTbetaR-signalling 0 4 0 3
theislab/2022_Bakhti_pancreas_Syt13 0 3 0 0
theislab/archmap_admin 0 2 0 0
theislab/archmap_doc 0 3 0 0
theislab/collideseq_reproducibility 0 2 0 0
theislab/consensus-clustering-evaluation 0 4 0 0
theislab/dali 0 7 0 1
theislab/edgepy 0 3 0 0
theislab/ELS_analysis 0 2 0 0
theislab/GoBI_single_cell 0 3 0 0
theislab/hadge-reproducibility 0 2 0 0
theislab/icml_cbw_2022_clcvae 0 3 0 0
theislab/integraph 0 2 4 0
theislab/ipsc_ipd_analysis 0 3 0 0
theislab/LungAgingAtlas 0 5 0 0
theislab/MetaMap-web 0 4 2 0
theislab/mubind-benchmark 0 2 19 0
theislab/multicpa-reproducibility 0 2 0 0
theislab/organoid_dexamethason_stimulation 0 3 0 1
theislab/pancreas-targeted_pharmacology 0 6 1 2
theislab/pdac_analysis 0 2 0 0
theislab/prophet-reproducibility 0 3 0 0
theislab/reproducability_AutoGeneS 0 3 0 0
theislab/reproducibility_AutoGeneS 0 3 0 0
theislab/scanpy.org 0 7 1 0
theislab/scanpy_neighbors 0 3 0 1
theislab/scarches_notebooks 0 3 0 0
theislab/scProtVelo 0 1 0 0
theislab/sc_ketamine_analysis 0 4 0 0
theislab/sfaira-portal 0 4 2 0
theislab/sfaira-site 0 4 0 0
theislab/sfaira_benchmarks 0 3 0 0
theislab/sfaira_extension 0 3 1 0
theislab/spapros-smk 0 2 0 1
theislab/spatialdata-db-submission 0 2 0 0

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