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Commits on Jun 15, 2019

• GUI dialog for setting parameters

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• quieter warning messages and remove unused parameter "once"

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• save a copy of the mask with ignored ROIs in gray

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• correct handling of missing data in neighbor(); code as -1 in both input and output

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• use minarea_um2 to ignore small cell ROIs

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• improvements to mask processing (close and fill)

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Commits on Jun 14, 2019

• I meant to say non-negative

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• enforce non-zero values in bandx[] and neighbor()

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• missing data in bandx[] recoded as -1

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  a9259a9

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• update the default acqname

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  7706b61

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• fix an issue with the hint file

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  2959d44

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• Merge branch 'master' of https://github.com/tituslabumn/Seven

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• bug fixes for Livia

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Commits on Jun 7, 2019

• Add files via upload

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Commits on Apr 9, 2019

• feature: output neighbor spacings in the proper row for their right-hand filopod

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• feature: explict row identifiers in output files

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• verify file path is non-null

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• cleanup variable name used to count unassigned filopodia

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  9abf2c4

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• bug: specify that duplicate crossing points are their own neighbors

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  e34ac45

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• bug: redundant initialization of bandx[]

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• cleanup neighbor() to show how the arrays are initialized

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• bug: interpolation was not reflected in angle measurement

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• bug: colinear() failed at x or y asypmtotes

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• feature: smoothing cell perimeter ROI

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• bug: minarea was too large

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• add some error checks

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Commits on Apr 8, 2019

• feature: report cell position in analysis-results

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• bug: colinear() and filopod.colinear() did not calculate the same internal values

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  5d8b85a

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• bug: ensure nonzero values in neighbor()

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Commits on Apr 3, 2019

• bug: getValue() has undocumented behavior

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• bug: resolve conflicts from previous commit

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• Update seven.js

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• nashorn compatiblity - array instance

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• bug: array bounds were wrong (used fp instead of regfp)

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• bug: force the Java parseInt() to be used instead of the script engine equivalent

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