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Issues list

integer overflow for large genome
#3 opened Oct 21, 2019 by zhangrengang updated Oct 21, 2019
DotPlotly appears to move data from one contig to another
#5 opened Dec 12, 2019 by jbgonzalez77 updated Dec 12, 2019
Specific coordinates
#7 opened Dec 9, 2020 by Paula27222 updated Dec 9, 2020
zero position
#2 opened May 7, 2018 by njaupan updated Apr 5, 2021
2
Citation
#9 opened Aug 12, 2021 by phrh updated Aug 12, 2021
Average identity
#10 opened Sep 21, 2021 by annecmg updated Sep 21, 2021
mean percent identity
#12 opened Feb 22, 2022 by zhaotao1987 updated Feb 22, 2022
object 'tickvals' not found.. cannot generate interactive plot in html
#13 opened Feb 22, 2022 by zhaotao1987 updated Feb 22, 2022
Sort chromosomes by name
#8 opened Mar 12, 2021 by jhtrujillo updated Apr 12, 2022
5
error creating dotplot
#11 opened Nov 25, 2021 by Estherrr1997 updated Apr 13, 2022
13
error in htmlwidges
#14 opened Mar 30, 2022 by Estherrr1997 updated May 13, 2022
failed to create a plot
#6 opened Nov 24, 2020 by lvbakker updated Aug 25, 2022
3
minimap2 -x asm does not detect some alignments / synteny
#19 opened Jan 17, 2023 by theo-allnutt-bioinformatics updated Jan 17, 2023
The x-axis chromosome ID is missing in the result of pafCoordsDotPlotly.R.
#21 opened May 20, 2023 by lvqiang0120 updated May 20, 2023
library won't load
#22 opened Jun 1, 2023 by rmormando updated Jun 1, 2023
How to generate a pdf or svg file?
#18 opened Nov 4, 2022 by Sven-Winter updated Jan 17, 2024
4
error with mummerCoordsDotPlotly.R
#25 opened May 20, 2024 by yanyew updated May 20, 2024
1
Error in reading paf file
#17 opened Aug 19, 2022 by nina-maryn updated Jul 10, 2024
3
pafCoordsDotPlotly.R Colour reverse complement hits
#24 opened Apr 2, 2024 by tallnuttrbgv updated Oct 28, 2024
2
Generate plot in pdf/svg format
#26 opened Nov 29, 2024 by Bio-info-ai updated Nov 29, 2024
Visual PAF file times error
#27 opened Dec 25, 2024 by jiangwenhao3001 updated Dec 25, 2024
Issue executing pafCoordsDotPlotly.R
#20 opened May 10, 2023 by jsromanowski updated Dec 25, 2024
4
error on the testing shiny app
#28 opened Jan 22, 2025 by dcopetti updated Jan 22, 2025
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