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co-assembly memory requirements #281

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kmbuckeridge opened this issue Jul 15, 2020 · 0 comments
Open

co-assembly memory requirements #281

kmbuckeridge opened this issue Jul 15, 2020 · 0 comments

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@kmbuckeridge
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Hi voutcn,
I have 12 soil metagenome samples - same soil, different treatments applied - and I would like to co-assemble these, however, I am hitting an error code that I think is related to memory. I assembled one of these paired-end samples and it took 42GB and 65h, do I need to multiply this x12 for co-assembly? My failed co-assembly log is attached. I used --presets meta-large.
Thank you!
Kate
megahit_20200715.txt

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