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addModuleScore.Rd
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% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/ModuleScore.R
\name{addModuleScore}
\alias{addModuleScore}
\title{Add Module Scores to an ArchRProject}
\usage{
addModuleScore(
ArchRProj = NULL,
useMatrix = NULL,
name = "Module",
features = NULL,
nBin = 25,
nBgd = 100,
seed = 1,
threads = getArchRThreads(),
logFile = createLogFile("addModuleScore")
)
}
\arguments{
\item{ArchRProj}{An \code{ArchRProject} object.}
\item{seed}{A number to be used as the seed for random number generation. It is recommended to keep track of the seed used so that you can
reproduce results downstream.}
\item{threads}{The number of threads to be used for parallel computing.}
\item{logFile}{The path to a file to be used for logging ArchR output.}
}
\description{
This function computes imputations weights that describe each cell as a linear combination of many cells based on a MAGIC diffusion matrix.
}
\details{
RRR
}