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Showing results

Doublet detection in single-cell RNA-seq data.

Jupyter Notebook 85 23 Updated May 13, 2022

gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.

Python 219 64 Updated May 1, 2024

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

Python 133,478 26,662 Updated Oct 16, 2024

RNA foundation model

Jupyter Notebook 197 20 Updated Apr 1, 2024

Tensors and Dynamic neural networks in Python with strong GPU acceleration

Python 82,998 22,379 Updated Oct 16, 2024

《动手学深度学习》:面向中文读者、能运行、可讨论。中英文版被70多个国家的500多所大学用于教学。

Python 62,705 10,957 Updated Jul 30, 2024

Program for the analysis and visualization of whole-slide images in digital pathology

C++ 614 165 Updated Sep 12, 2023

python binding for libvips using cffi

Python 639 49 Updated Oct 12, 2024

Clonotype Neighbor Graph Analysis

Jupyter Notebook 81 18 Updated Sep 12, 2024

xrdp: an open source RDP server

C 5,682 1,726 Updated Oct 14, 2024

QML based X11 and Wayland display manager

C++ 1,892 331 Updated Oct 15, 2024

Tools to process and analyze deep sequencing data.

Python 677 208 Updated Oct 14, 2024

bedtools - the swiss army knife for genome arithmetic

C 933 287 Updated Jul 19, 2024

Tools for working with SAM/BAM data

D 563 105 Updated Jul 3, 2024

Tools (written in C using htslib) for manipulating next-generation sequencing data

C 1,615 578 Updated Oct 16, 2024

A fast and sensitive gapped read aligner

C++ 667 158 Updated Jul 24, 2024

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data

Perl 463 151 Updated Jul 16, 2024

Qwen2.5 is the large language model series developed by Qwen team, Alibaba Cloud.

Shell 8,880 556 Updated Oct 15, 2024

scripts and notebooks from sanbomics

Jupyter Notebook 347 132 Updated Jul 10, 2024

deeplearning.ai , By Andrew Ng, All slide and notebook + data + solutions and video link

Jupyter Notebook 1,394 534 Updated Nov 2, 2018

Spatial Single Cell Analysis in Python

Python 432 79 Updated Oct 14, 2024

Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 500 universities from 70 countries including Stanford, MIT, Harvard, and Cambridge.

Python 23,498 4,308 Updated Aug 18, 2024

Animation engine for explanatory math videos

Python 67,941 6,070 Updated Oct 16, 2024

An open and interoperable data framework for spatial omics data

Python 231 43 Updated Oct 15, 2024

Lean Conky config that just works

Lua 123 30 Updated Sep 14, 2024

Get up and running with Llama 3.2, Mistral, Gemma 2, and other large language models.

Go 93,502 7,384 Updated Oct 16, 2024

A Bayesian model for compositional single-cell data analysis

Jupyter Notebook 148 24 Updated May 2, 2023

Free ChatGPT API Key,免费ChatGPT API,支持GPT4 API(免费),ChatGPT国内可用免费转发API,直连无需代理。可以搭配ChatBox等软件/插件使用,极大降低接口使用成本。国内即可无限制畅快聊天。

Python 22,765 1,722 Updated Sep 26, 2024

🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

Rust 166 15 Updated Jul 12, 2024

matplotlib: plotting with Python

Python 20,138 7,600 Updated Oct 16, 2024
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