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Starred repositories

5 stars written in Shell
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Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.

Shell 137 10 Updated Dec 26, 2024

Pipeline for linkage map construction from NGS data

Shell 12 1 Updated Feb 10, 2023

Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you need is a reference genome and some short reads

Shell 10 Updated Nov 25, 2024

A simple visualisation tool for Multiple Sequence Alignment.

Shell 5 Updated Jun 26, 2023

Scripts supporting the manuscript submitted to the Molecular Ecology Resources Special Issue 'Omics for species conservation'

Shell 4 Updated Dec 19, 2023