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Name		Name	Last commit message	Last commit date
parent directory ..
STEP1.1.Dowmload_data_huawei_OBS.sh		STEP1.1.Dowmload_data_huawei_OBS.sh
STEP1.2.Dowmload_data_form_EMBI-EBI.sh		STEP1.2.Dowmload_data_form_EMBI-EBI.sh
STEP2.1.Data_1st_qc_by_fastqc.sh		STEP2.1.Data_1st_qc_by_fastqc.sh
STEP2.2.Cutadapt_raw_data_by_cutadapt_1.0V.sh		STEP2.2.Cutadapt_raw_data_by_cutadapt_1.0V.sh
STEP2.3.Readapter_data_qc_by_fastqc.sh		STEP2.3.Readapter_data_qc_by_fastqc.sh
STEP2.4.Cutadapt_option_rm_5_15bp_by_cutadapt_1.0V.sh		STEP2.4.Cutadapt_option_rm_5_15bp_by_cutadapt_1.0V.sh
STEP2.5.Rm5_15bp_fastqc_report.sh		STEP2.5.Rm5_15bp_fastqc_report.sh
STEP3.1.Build_mt-RNA-index.sh		STEP3.1.Build_mt-RNA-index.sh
STEP3.2.Remove_mapping_mt-RNA_hisat2.sh		STEP3.2.Remove_mapping_mt-RNA_hisat2.sh
STEP3.3.Fastqc_remove_mt-RNA.sh		STEP3.3.Fastqc_remove_mt-RNA.sh
STEP3.4.Fastqc_mapping_mt-RNA_bam.sh		STEP3.4.Fastqc_mapping_mt-RNA_bam.sh
STEP4.1.Build_index_by_hisat2.sh		STEP4.1.Build_index_by_hisat2.sh
STEP4.2.Mapping_to_grnome_by_hisat2.sh		STEP4.2.Mapping_to_grnome_by_hisat2.sh
STEP4.3.Mapping_to_grnome_by_hisat2_dutp.sh		STEP4.3.Mapping_to_grnome_by_hisat2_dutp.sh
STEP4.4.Mapping_bam_sort_index.sh		STEP4.4.Mapping_bam_sort_index.sh
STEP5.1.Count_by_featurecount_cds_hisat2.sh		STEP5.1.Count_by_featurecount_cds_hisat2.sh
STEP5.2.Count_by_featurecount_exon_hisat2.sh		STEP5.2.Count_by_featurecount_exon_hisat2.sh
STEP5.3.Count_by_featurecount_gene_hisat2.sh		STEP5.3.Count_by_featurecount_gene_hisat2.sh
STEP5.4.Count_by_featurecount_dUTP_cds_hisat2.sh		STEP5.4.Count_by_featurecount_dUTP_cds_hisat2.sh
STEP5.5.Count_by_featurecount_dUTP_exon_hisat2.sh		STEP5.5.Count_by_featurecount_dUTP_exon_hisat2.sh
STEP5.6.Count_by_featurecount_dUTP_gene_hisat2.sh		STEP5.6.Count_by_featurecount_dUTP_gene_hisat2.sh
STEP6.1.Build_index_by_STAR.sh		STEP6.1.Build_index_by_STAR.sh
STEP6.2.mapping_by_STAR.sh		STEP6.2.mapping_by_STAR.sh
STEP6.3.mapping_by_STAR_dutp.sh		STEP6.3.mapping_by_STAR_dutp.sh
STEP6.4.mapping_result_qc_buing_index.sh		STEP6.4.mapping_result_qc_buing_index.sh
STEP7.1.Count_by_featurecount_cds.sh		STEP7.1.Count_by_featurecount_cds.sh
STEP7.2.Count_by_featurecount_exon.sh		STEP7.2.Count_by_featurecount_exon.sh
STEP7.3.Count_by_featurecount_gene.sh		STEP7.3.Count_by_featurecount_gene.sh
STEP7.4.Count_by_featurecount_dUTP_cds.sh		STEP7.4.Count_by_featurecount_dUTP_cds.sh
STEP7.5.Count_by_featurecount_dUTP_exon.sh		STEP7.5.Count_by_featurecount_dUTP_exon.sh
STEP7.6.Count_by_featurecount_dUTP_gene.sh		STEP7.6.Count_by_featurecount_dUTP_gene.sh
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