VT analytic

[Rosadosa]

Hi Zhanxw,

thank you for your very valuable tool!
I have a question regarding the Variable threshold analytic option.
In the manual it is stated this option supports both binary and quantitative phenotypes.
However when I try to run the analysis, a warning appears that the analytic option doesn't work on a binary phenotype, and all my values are "NA".

Is this merely a mistake in the manual, or is there something else going on?

Best,
Roos

[zhanxw]

Thanks Roos.
I can replicate the problem.

The VT analytic option should work. I will fix this bug.

[zhanxw]

From source code,
https://github.com/zhanxw/rvtests/blob/master/src/Model.h#L2132,
It looks like that I have not implemented the analytic VT method for binary trait.
I plan to do it when I have more time.

[learb]

Hi Zhanxw,

thank you for this really valuable tool!
I see you had in mind to implement analytic VT for binary trait, but I still get the error described here. Is this still an enhancement you are considering? do you have a work-around?

Thanks
Lea