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  • goldmine Public

    Forked from jeffbhasin/goldmine

    Annotate genomic contexts and discover functional element enrichments

    R MIT License Updated Jan 19, 2023

  • REDItools Public

    Forked from BioinfoUNIBA/REDItools

    REDItools are python scripts to investigate RNA editing at genomic scale.

    Python MIT License Updated Apr 15, 2021

  • tidybulk Public template

    Forked from stemangiola/tidybulk

    Brings transcriptomics to the tidyverse

    R Updated Oct 17, 2020

  • MINTIE Public

    Forked from Oshlack/MINTIE

    Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.

    Python MIT License Updated Oct 11, 2020

  • SUPPA Public

    Forked from comprna/SUPPA

    SUPPA2: Fast quantification of differential splicing

    Python MIT License Updated Jun 24, 2020

  • CB2 Public

    Forked from hyunhwan-jeong/CB2
    R Other Updated Nov 26, 2019

  • RNAEditingIndexer Public

    Forked from a2iEditing/RNAEditingIndexer

    A tool for the calculation of RNA-editing index for RNA seq data

    Makefile Other Updated Nov 17, 2019

  • test_workflowr Public

    R Updated Jun 24, 2019

  • LSD Public

    Forked from stineb/LSD

    ❗ This is a read-only mirror of the CRAN R package repository. LSD — Lots of Superior Depictions

    R Updated May 14, 2019

  • MultiQC_TestData Public

    Forked from MultiQC/test-data

    Test data for MultiQC. See https://github.com/ewels/MultiQC

    HTML MIT License Updated Jan 13, 2018

  • JACUSA Public

    Forked from dieterich-lab/JACUSA

    JAVA framework for accurate SNV assessment

    HTML GNU General Public License v3.0 Updated Nov 22, 2017

  • superTranscript_paper_code Public

    Forked from Oshlack/superTranscript_paper_code

    This repository contains code and scripts used to generate and analyse data for the superTranscript/Lace paper.

    Jupyter Notebook Updated Sep 27, 2016

  • foreign Public

    Forked from lh3/foreign

    Modified or extracted from other programs

    C Updated Dec 14, 2011