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biobakery Public
Forked from biobakery/biobakerybioBakery tools for meta'omic profiling
Shell UpdatedNov 27, 2021 -
eASV-pipeline-for-515Y-926R Public
Forked from jcmcnch/eASV-pipeline-for-515Y-926RThis is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools
Shell UpdatedJun 25, 2021 -
HumanMicrobiome Public
Forked from MaximilianKohler/HumanMicrobiomeHuman Microbiome wiki
UpdatedJun 2, 2021 -
megahit Public
Forked from voutcn/megahitUltra-fast and memory-efficient (meta-)genome assembler
C++ GNU General Public License v3.0 UpdatedOct 15, 2019 -
canu Public
Forked from marbl/canuA single molecule sequence assembler for genomes large and small.
C++ UpdatedSep 12, 2019 -
kaiju Public
Forked from bioinformatics-centre/kaijuFast taxonomic classification of metagenomic sequencing reads using a protein reference database
C GNU General Public License v3.0 UpdatedSep 5, 2019 -
getting-started-with-genomics-tools-and-resources Public
Forked from crazyhottommy/getting-started-with-genomics-tools-and-resourcesUnix, R and python tools for genomics and data science
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qcat Public
Forked from nanoporetech/qcatqcat is Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.
Python Mozilla Public License 2.0 UpdatedAug 8, 2019 -
pandas Public
Forked from pandas-dev/pandasFlexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 6, 2018 -
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedAug 14, 2018 -
trinityrnaseq Public
Forked from trinityrnaseq/trinityrnaseqTrinity RNA-Seq de novo transcriptome assembly
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bcgTree Public
Forked from molbiodiv/bcgTreeAutomatically calculate phylogenetic trees from bacterial core genes
Perl MIT License UpdatedJul 20, 2018