The region of interest (ROI) algorithm aims to extract features in complex data, such as mass spectrometry (MS) data. This repo provides implementations for the algorithm proposed in the paper:
Tautenhahn, R., Böttcher, C. & Neumann, S. Highly sensitive feature detection for high resolution LC/MS. BMC Bioinformatics 9, 504 (2008). https://doi.org/10.1186/1471-2105-9-504
- Provide multiple implementations of the ROI algorithm written in various languages.
- Optimize the performance of the implementations to be as fast a possible in the given language.
- Provide improvements to the algorithm, if possible.
In order to install the Python implementation of the ROI algorithm. Pip install it using the following command:
pip install git+https://github.com/AlexM954/ROI.git#egg=roi&subdirectory=python