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- Model-based segmentation of vertebral bodies from MR images with 3D CNNs - Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation - U-net: Convolutional networks for biomedical image segmentation - 3D U-Net: Learning dense volumetric segmentation from sparse annotation. - V-Net: Fully convolutional neural networks for volumetric medical image segmentation.arXiv:1606.04797 - The importance of skip connections in biomedical image segmentation Spatial clockwork recurrent neural network for muscle perimysium segmentation - NPIS-2015 Parallel multi-dimensional LSTM, with application to fast biomedical volumetric image segmentation - Multi-dimensional gated recurrent units for the segmentation of biomedical 3D-data - Combining fully convolutional and recurrent neural networks for 3D biomedical image segmentation - Recurrent fully convolutional neural networks for multi-slice MRI cardiac segmentation. arXiv:1608.03974 - Automatic detection and classification of colorectal polyps by transferring low-level CNN features from nonmedical domain - Deep learning for multi-task medical image segmentation in multiple modalities - Sub-cortical brain structure segmentation using F-CNNs - Segmentation label propagation using deep convolutional neural networks and dense conditional random field - Fast fully automatic segmentation of the human placenta from motion corrupted MRI - Automatic detection of cerebral microbleeds from MR images via 3D convolutional neural networks - Non-uniform patch sampling with deep convolutional neural networks for white matter hyperintensity segmentation - A unified framework for automatic wound segmentation and analysis with deep convolutional neural networks - Deep 3D convolutional encoder networks with shortcuts for multiscale feature integration applied to Multiple Sclerosis lesion segmentation - Brain tumor segmentation using convolutional neural networks in MRI images
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