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@BioSeq

BioSeq

Bioinformatics high-throughput sequencing science outreach group at Tufts University affiliated with the Walt Laboratory.

Popular repositories Loading

  1. Genetics-of-Race-Analysis Genetics-of-Race-Analysis Public

    BioSeq Genetics of Race Analysis

    Python 1

  2. generateMicrobiomeReports generateMicrobiomeReports Public

    Use csv input file to produce pie charts and Venn diagrams to summarize microbiome results for students

    R 1 1

  3. Microbiome-graph Microbiome-graph Public

    Produces a network of given microbiome data

    Python 1 1

  4. FastqKnowledge FastqKnowledge Public

    Educational App to Allow Students to Query FASTQ Files

    Python

  5. GeneticsOfRaceAnalysisOLD GeneticsOfRaceAnalysisOLD Public

    Python

  6. AutomatedJaccard AutomatedJaccard Public

    Python

Repositories

Showing 10 of 16 repositories
  • WaterMicrobiomeData Public
    BioSeq/WaterMicrobiomeData’s past year of commit activity
    0 0 0 0 Updated May 18, 2017
  • QIIMEtoBaseSpace Public

    Inputs a QIIME microbiome file. outputs it into a file similar to that used in BaseSpace

    BioSeq/QIIMEtoBaseSpace’s past year of commit activity
    Python 0 1 0 0 Updated Feb 24, 2017
  • generateMicrobiomeReports Public

    Use csv input file to produce pie charts and Venn diagrams to summarize microbiome results for students

    BioSeq/generateMicrobiomeReports’s past year of commit activity
    R 1 1 1 1 Updated Feb 6, 2017
  • Microbiome-graph Public

    Produces a network of given microbiome data

    BioSeq/Microbiome-graph’s past year of commit activity
    Python 1 1 0 0 Updated Aug 5, 2016
  • AutomatedJaccard_csvInput Public

    Given a spreadsheet of counts for various genus (or other OTU level) for each sample, return a table of pairwise Jaccard similarities

    BioSeq/AutomatedJaccard_csvInput’s past year of commit activity
    Python 0 0 0 0 Updated May 4, 2016
  • GOR-Commandline Public
    BioSeq/GOR-Commandline’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 20, 2016
  • Mutations-Investigation Public
    BioSeq/Mutations-Investigation’s past year of commit activity
    Python 0 0 0 0 Updated Jan 7, 2016
  • Metgenomics-Analysis Public
    BioSeq/Metgenomics-Analysis’s past year of commit activity
    Python 0 MIT 1 3 0 Updated Dec 1, 2015
  • Genetics-Of-Race-Mac-App Public
    BioSeq/Genetics-Of-Race-Mac-App’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 28, 2015
  • GOR-Windows-App Public
    BioSeq/GOR-Windows-App’s past year of commit activity
    Python 0 0 0 0 Updated Oct 21, 2015
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